Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3456 |
Symbol | |
ID | 8227037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4232360 |
End bp | 4233547 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644931289 |
Product | elongation factor Tu |
Protein accession | YP_003087831 |
Protein GI | 255037210 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0019954 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.040837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG AGACGTTTGA CCGCTCGAAA CCCCACGTAA ATATTGGTAC TATCGGGCAC GTTGACCACG GTAAAACTAC CCTTACAGCG GCGATTACAA CTGTGTTGGC TGATAAAGGT TTTGCACAGA AACGCGACTT TTCTTCAATC GACAATGCTC CTGAAGAAAA AGAGCGCGGT ATCACAATCA ACACTTCTCA CGTAGAATAC CAGACAGCCA ACCGTCACTA TGCGCACGTT GACTGCCCAG GTCACGCTGA CTACGTGAAG AACATGGTAA CTGGTGCTGC TCAGATGGAC GGCGCAATCA TCGTGGTTGC TGCTACTGAC GGTCCAATGC CACAAACTCG TGAGCACATC CTTCTGGCTC GTCAGGTAGG TGTTCCTCAG CTTGTTGTGT TCATGAACAA AGTGGACATG GTGGATGATC CGGAACTTCT TGAACTCGTT GAGATGGAGA TCCGTGAGCT TCTTAGCTTC TACGAATTCG ATGGTGACAA CATTCCTGTA ATCCAGGGAT CTGCTTTGGG TGGTCTGAAC GGCGAGCCTA AGTGGGTTAA AACTATCGAA GACCTGATGG AAGCTGTTGA TACCTGGATT CCAATTCCTC CACGTATGAC TGATCTTCCT TTCTTGATGC CTGTTGAAGA CGTATTCTCG ATCACTGGTC GTGGTACTGT TGCAACTGGT CGTATTGAGC GTGGTGTGAT CAACTCTGGC GAAGCTGTTG ATATCCTTGG TATGGGTGCA GAAGGTCTTA AATCAGTAGT AACTGGTGTT GAGATGTTCC GCAAAATCCT TGACCGTGGT GAAGCTGGTG ACAACGTAGG TCTCCTTCTC CGTGGTATCG ACAAAACTGA TATCCGTCGT GGTATGGTTA TCTGTAAACC AGGCTCAGTG AAGCCTCACT TGCACTTCAA AGGTGAAGTT TACGTACTGT CGAAAGAAGA AGGTGGACGT CACACTCCAT TCTTTAACAA ATACCGTCCT CAGTTCTACT TCCGTACCAC TGACGTGACA GGTGAAATTA CACTTCCTGC TGGTGTTGAA ATGGTTATGC CAGGTGACAA CATCACTATC GAAGTGAAGC TGATCAACAA AATCGCTATG GAAAAAGGTC TTCGTTTCGC GATCCGTGAA GGTGGACGTA CCGTAGGTGC TGGTCAGGTA ACTGAAATTC TTGACTAA
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Protein sequence | MAKETFDRSK PHVNIGTIGH VDHGKTTLTA AITTVLADKG FAQKRDFSSI DNAPEEKERG ITINTSHVEY QTANRHYAHV DCPGHADYVK NMVTGAAQMD GAIIVVAATD GPMPQTREHI LLARQVGVPQ LVVFMNKVDM VDDPELLELV EMEIRELLSF YEFDGDNIPV IQGSALGGLN GEPKWVKTIE DLMEAVDTWI PIPPRMTDLP FLMPVEDVFS ITGRGTVATG RIERGVINSG EAVDILGMGA EGLKSVVTGV EMFRKILDRG EAGDNVGLLL RGIDKTDIRR GMVICKPGSV KPHLHFKGEV YVLSKEEGGR HTPFFNKYRP QFYFRTTDVT GEITLPAGVE MVMPGDNITI EVKLINKIAM EKGLRFAIRE GGRTVGAGQV TEILD
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