| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3431 |
|---|
| Symbol | |
|---|
| ID | 8227010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4193356 |
|---|
| End bp | 4196787 |
|---|
| Gene Length | 3432 bp |
|---|
| Protein Length | 1143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644931262 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_003087806 |
|---|
| Protein GI | 255037185 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.204539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA ACGAATATAA AACCCTAGGC TTCACCAACT GGTGCGTAGA GAACAGGACG
ACGATCTACA TCTTTACGTT CATCATCACG CTGGCGGGGT TCATGGTGTA CAATAACCTG
CCGAAGGAGC AGTTCCCGGA CATTAAAATC CCGCAGATTT ACATTAATAC GGTGTATTTC
GGGACTGCGC CGGCCGATAT CGAAAACACG ATCAACAAGC CGATCGAGAA GCAGCTCAAA
TCCCTCAACG GGGTGAAGAA GATCAAATCC AATGCATTGC AGGACGTGTC GGTAATCCTG
GTGGAATTTA CGCCGGATGT GGCCGTGGAA GTCGCCTTGC AGCGGGTGAG GGATGCGATA
GATAAGGCCA AAACCGATTT GCCCCAAAAC CTCGACACGG GCCCCACAGC CCAGGACGTG
AACTTTTCGG AGTTCCCGAT CATGAACGTC AACATTGCCG GTAACTATTC TTTGAAACAA
CTGAAGGAAT ATGCCGAAGA TTTGCAGGAC GGGATCGAAG CATTGCCGGA AATTACCCGT
GTGGATATTC TCGGTGCATT GAACCGCGAG ATCCAGATCA ACGTGAACCT CGACCGCATG
AAATCGACCG GTTTGACATT CTATGACGTG CAAACGGCGA TTCAGAGTGA AAACATCAAC
GTTTCGGGCG GCGAACTGAA CGTGCAGGGC GTGCGCCGGA CGCTGCGCGT GAAAGGCGAA
TACACGGATG TGGCCGAAAT GGCGAATATC CGCATTCGTA CCTCCACCGG TGCGACGGTC
CGCCTGGGCG ACATTGCCGA AGTGGCCGAC AGCTTTGAAG AACAACAGGA TTTCGCACGT
TTGGCCAATA AATCGGTTAT TACCCTGAAC GTGATCAAGC GCTCGGGTGA AAACCTGGTG
GACGCAGCCG ATAAAATCGA AGATGTCATC GCGGACTTTA AAGAAAACCG CTTTCCTGCC
GGTTTGGATG TAAAAATCAC CGCCGACCAA TCGATCCAGA CGCGGGCTGA TTTGCACGAT
TTGATCAACA CCGTAGTACT CGGCTTTATT TTCGTGGTGA TGGTGCTCAT GTTCTTCATG
GGTGTGCGCG ACGCGATTTT CGTGGGGCTT TCGGTGCCAT TGTCCGCATT GGTAGCATTT
GTGTTAATGC CTATTATCGG ACCGATGGTC GGGACGGAAT TCACACTGAA CACGATCGTG
CTCTTCGCTT TCCTGCTCGG GATCGGATTG GTGGTGGACG ACGCGATTGT GGTAATCGAA
AACACGCACC GTCTTTTCAA CCAGCATAAG GACTGGACGA TCCAACAAGC GGTGAAAGCG
GCTGCGGGAG AGGTGTTCAT TCCGGTACTT TCGGGAACAT TAACGACCAT TGCGCCATTC
TTCCCATTGC TTTTCTGGAC GGGTATCGTC GGGGAGTTTA TGAAATTCAT GCCGCTGACG
CTCATCATTA CGCTCGGCGC GTCGCTTTTC GTGGCTTATG TGATGAACCC CGTGTTTGCG
GTGTCGTTCA TGGGCCGCCA TGATGATGAG AAAGAAGCAC ACGACACGAG TTTTAAAGCC
ATCCGCAGGC CGCTAATCAT ACTTGTGGTA GCAGCATTGA TCGGCTACGC CATCGACCGG
GGTATTGGAA ACTTCTTTGT ATTTATCCTC CTCCTGTGGG TTTTCAACCA TTACATTCTG
ACACCAAGAA TCCTTGTCCC ATTCCAGGAC CGGCTGCTTC CATCCCTTAA AAATGGCTAC
CGCAAACTCA TCGACTGGCT TTTGAGAGGT TGGAGACCGG TAGTGGCCAT TGTGGCTGTG
TTCCTGTTGC TGATCGCGAC GTTCATCATT ACCGGCATTG CCCAGCCGAA AGTGCTCTTC
TTCCCGAGCG GTGATCCTGA TTATGTGTAC GTCTACAACA AATTACCCAT CGGTACCGAC
GCCCGCGTGA CCGACTCCGT AACCAAGATC ATCGAGCAGC GTGTTTTTGA TGTGTTGGAA
AAAGAAAAAG CGATGGATAT GGTGAACTCC GTCATCGCCA ACGTCGGTAA AAACGCCGGT
GACCCTTACA ACCCCGACCG CTCGGCCACG CCGCACAAGT CGAAAGTGAC GGTAGCATTC
GTGTATGGTA CCGAACGCGG CGGAAGGTCG TCCGAAGCGA TCCTTCGCAA GATCCGCGAT
GCGGTAGCCG GCATTCCGGG TGCTGAAATT TCGGTAGAAC GCGAAGCGGT GGGCCCTCCT
ACCGGTAAGC CTATTTCAAT CGAGATTTCC GGTGATGAAT TTGATGTGCT TCAAAAACTG
GAAAAAGACG TTCTGAAAAA AGTGCAGGAT TCGGGTATCG AAGGGATCGA TCAGCTCCGC
TCCGATCTCG TGACCAACAA GCCCGAAATC GTGATCGACA TCGACCGCGA AAAAGCGCAG
CGCGAGGGCA TTAGTTCGCA ACAAATCGCA CTGGCGGTCC GTACGGCATT GTTCGGTCTG
GAAGTTTCCA AATTCCGTGA CGATAAGGAC GAGTACCCGA TCATGGTGCG CCTCGAAAAA
GATGACCGCG AGCAAATCGA AAAACTGCTC AGCCTGAACG TCGTTTACCG CGACATGAAC
ATGGGCGGTG CATTGCGCCA GGTTCCCATT ACGTCAGTAG CGAACATCCA TTACTCGACC
ACTTTCAGCC AGATCAACCG GCAAGACCAG CGACGCATCG TCACATTGGG CTCGGACGTA
CTGCCCGGCT ACAATGCCAA CGAAATCGTG GCACAAATCC AAACCCTGGT GCAGGAAATG
GAGGTACCAA ACGGCTATAC GATCAAAATG GGCGGCGAGC AGGAAGAGCA GGCTGAATCG
ATGGCGTTCC TCGGAACAGC GTTCGGCGCG GCGATCATGC TGATTTACCT CATCCTGGCG
ACGCAGTTCA ACTCGGTGGT CAAGCCATTC ATCATCTTCT TCACGATCGT GCTTTCGCTC
ATCGGGGTGT TGCTGGGCTT CGTGATATTC AACAAAGACT TCTCCGTAAT CATGTCCGGT
GTGGGGATCA TCGCTTTGGC AGGTATTGTG GTGAAAAACG GTATCCTGCT CATCGAGTTC
ATCGAAGAAC TTCGCGGGCG CGGGTATCCG ATGCGTGAAG CCATTATCGA AGGCGGCGCG
ATCCGTCTGA CGCCCGTATT GCTCACCGCC TCGGCCGCCG TATTGGGTCT GGTACCGCTT
GCATTAGGTA TTACGGTCGA TTTCGTGGGT CTTTTCCGCG ATCTCGCGCC CGATCTGATC
ATTGGCGGGC CAAGCTCCGT GTTCTGGAAC ATCCTCGCAT GGACGATCAT CTTCGGCCTC
ACATTCTCGA CCGTACTCAC GCTTGTGATG GTGCCTTGCA TGTATTACGT GAATGAGCGC
GTCCGCGACA AGTGGTTCCG GAAGGGCAAA CCTGAGCCGG TAAACCCGAA TTGGCAGAAC
GAAACGATCT GA
|
|---|
| Protein sequence | MKFNEYKTLG FTNWCVENRT TIYIFTFIIT LAGFMVYNNL PKEQFPDIKI PQIYINTVYF
GTAPADIENT INKPIEKQLK SLNGVKKIKS NALQDVSVIL VEFTPDVAVE VALQRVRDAI
DKAKTDLPQN LDTGPTAQDV NFSEFPIMNV NIAGNYSLKQ LKEYAEDLQD GIEALPEITR
VDILGALNRE IQINVNLDRM KSTGLTFYDV QTAIQSENIN VSGGELNVQG VRRTLRVKGE
YTDVAEMANI RIRTSTGATV RLGDIAEVAD SFEEQQDFAR LANKSVITLN VIKRSGENLV
DAADKIEDVI ADFKENRFPA GLDVKITADQ SIQTRADLHD LINTVVLGFI FVVMVLMFFM
GVRDAIFVGL SVPLSALVAF VLMPIIGPMV GTEFTLNTIV LFAFLLGIGL VVDDAIVVIE
NTHRLFNQHK DWTIQQAVKA AAGEVFIPVL SGTLTTIAPF FPLLFWTGIV GEFMKFMPLT
LIITLGASLF VAYVMNPVFA VSFMGRHDDE KEAHDTSFKA IRRPLIILVV AALIGYAIDR
GIGNFFVFIL LLWVFNHYIL TPRILVPFQD RLLPSLKNGY RKLIDWLLRG WRPVVAIVAV
FLLLIATFII TGIAQPKVLF FPSGDPDYVY VYNKLPIGTD ARVTDSVTKI IEQRVFDVLE
KEKAMDMVNS VIANVGKNAG DPYNPDRSAT PHKSKVTVAF VYGTERGGRS SEAILRKIRD
AVAGIPGAEI SVEREAVGPP TGKPISIEIS GDEFDVLQKL EKDVLKKVQD SGIEGIDQLR
SDLVTNKPEI VIDIDREKAQ REGISSQQIA LAVRTALFGL EVSKFRDDKD EYPIMVRLEK
DDREQIEKLL SLNVVYRDMN MGGALRQVPI TSVANIHYST TFSQINRQDQ RRIVTLGSDV
LPGYNANEIV AQIQTLVQEM EVPNGYTIKM GGEQEEQAES MAFLGTAFGA AIMLIYLILA
TQFNSVVKPF IIFFTIVLSL IGVLLGFVIF NKDFSVIMSG VGIIALAGIV VKNGILLIEF
IEELRGRGYP MREAIIEGGA IRLTPVLLTA SAAVLGLVPL ALGITVDFVG LFRDLAPDLI
IGGPSSVFWN ILAWTIIFGL TFSTVLTLVM VPCMYYVNER VRDKWFRKGK PEPVNPNWQN
ETI
|
|---|
| |