| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3430 |
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| Symbol | |
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| ID | 8227009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4192075 |
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| End bp | 4193205 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931261 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003087805 |
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| Protein GI | 255037184 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.516107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCA ATATTCTGAT TATAACCGCT ATTGCCACCA TTCTGGCCTC GTGCTCCGCC
AAGAAAGAAG GTTTGGAAGG CAAAAAACAA GAGCTCGCCG AGCTGAAAGC CCAGCAGGTC
GAGAATGAGA AAAAAATTAA GGCGCTCGAA ATCGAAATAG GCAAACTGGA CCCGAAGAAA
GCGACGGAAG CCAAAGTGAA GCCCGTGTCG ATCGATACGC TGAATGCAGA GACATTCAAG
CATTACGTGG AGCTGCAAGG CACCGTGGAC GCGAAAAACA ATGTGATGGT TACGCCCAAG
ACAGGCGGTG CTATCGTGGC GATGTACGTG AAAGAAGGCG ACGCCGTGAA AGCGGGAACC
GTGATCGGGA AGATCGACAA CAGCATTCTG GTGGAATCCA TCGAAGAGCT GAAAACGTCG
CTGAGCCTTG CCAATACCCT TTTCGAGAAG CAGAAAAACC TCTGGGACCA GAAGATCGGA
ACGGAACTGC AATACCTGCA AGCCAAAAAC AACAAGGAAT CGCTTGAAAA GAAACTCGCG
ACCCTGAATA CGCAGCTCGC ACAAACCAAC ATCGTGTCGC CCATGGCCGG CGTGGTGGAT
ATGGTGAACG TGAAAGTGGG CGAAATGGCT TCTCCGGGCG TTGGCGTGGT TCGCGTGGTG
AACCTGGGCA ACCTGAAAGT GTCGGCCAAA GTGTCGGACG TTTATGCGGC CAGCGTGAAA
AGGGGCGACG AAGTAATCAT CAAGTTTCCT GATTTGAAAA AGGAATACAA GGCACGGCTC
ACCTTTGTGA GTACCGCCGT GGACCCATTG TCGAGAACAT TCACGATCGA GGCTAACCTG
CCTTCCGACC GCGACATCAA GCCTAACATG ATGGCGCAGG TGCAGATCAA CGATGCTACG
AGCAAAAATG CACTGGCGAT TGACCAAAAC TACGTTCAGA GCACGGAGAA AGGGAATGTG
GTGTACGTAG CCGTAACCGA AGGCAACAAG AAAGTAGCCA AGGCGAAAGA AGTGAAAACC
GGCCTGAGCT ACAATGGCAA GGTGGAAATT CTTTCGGGAT TGTCGGCAGG CGACGCGCTG
ATCACGCTGG GCTACCAGGA AGTGTCAGAC GGCCAGCCGA TTAGCTACTA A
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| Protein sequence | MKSNILIITA IATILASCSA KKEGLEGKKQ ELAELKAQQV ENEKKIKALE IEIGKLDPKK
ATEAKVKPVS IDTLNAETFK HYVELQGTVD AKNNVMVTPK TGGAIVAMYV KEGDAVKAGT
VIGKIDNSIL VESIEELKTS LSLANTLFEK QKNLWDQKIG TELQYLQAKN NKESLEKKLA
TLNTQLAQTN IVSPMAGVVD MVNVKVGEMA SPGVGVVRVV NLGNLKVSAK VSDVYAASVK
RGDEVIIKFP DLKKEYKARL TFVSTAVDPL SRTFTIEANL PSDRDIKPNM MAQVQINDAT
SKNALAIDQN YVQSTEKGNV VYVAVTEGNK KVAKAKEVKT GLSYNGKVEI LSGLSAGDAL
ITLGYQEVSD GQPISY
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