Gene Dfer_3410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3410 
Symbol 
ID8226989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4168155 
End bp4168733 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content53% 
IMG OID644931241 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003087785 
Protein GI255037164 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.208492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA GCAAAGCATT CGAACCCGAA GAAAGGCTGG AAAAGGCAAA ATGCCTTTTC 
TGGCAAAAAG GCTATAACGC TACTTCCATG CAGGACCTCG TGGAGACGAT GGGGCTGAAC
CGAGGCAGCA TTTACGACAC CTATGGCGAC AAGCACAGCC TGTTCCTCCA ATGCCTGCGA
AGCTACACGG AAACCACGTT CGACGACTAC CTGAACGTGG CCGGGGAGTC GAAGTCGCCG
ATTAAGGCGG TGGAAAAGAT CATCAAAAAG GCGGCGGTAC GGACGATCGG GGAGGAAAGG
ACGTGTATGG GGGTGAGGTC GACGTTCGAA CTGGCTTCGG CAGATGAGGA AGTGCATGCG
GTGCTGAAAG ACAACACCAC CAAACTGACC GCCCTGCTGA AAGATCTGCT CAAAAAAGCG
CAAAAGGCGG ATGAAATCAG CAGCAAGCGC GACCCGGGCA TGCTGGCCCA TTTCATTGTA
TCCAGCTTTG CGGGTTTCTG GCAGTTTTAC CTCGTGTATG GCGATGCGGA GCTGGTGCAC
CAGCAAGCCG AGTTTTTAAT AAAATCGATC AAAAAATAA
 
Protein sequence
MARSKAFEPE ERLEKAKCLF WQKGYNATSM QDLVETMGLN RGSIYDTYGD KHSLFLQCLR 
SYTETTFDDY LNVAGESKSP IKAVEKIIKK AAVRTIGEER TCMGVRSTFE LASADEEVHA
VLKDNTTKLT ALLKDLLKKA QKADEISSKR DPGMLAHFIV SSFAGFWQFY LVYGDAELVH
QQAEFLIKSI KK