Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3410 |
Symbol | |
ID | 8226989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4168155 |
End bp | 4168733 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644931241 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003087785 |
Protein GI | 255037164 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.208492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA GCAAAGCATT CGAACCCGAA GAAAGGCTGG AAAAGGCAAA ATGCCTTTTC TGGCAAAAAG GCTATAACGC TACTTCCATG CAGGACCTCG TGGAGACGAT GGGGCTGAAC CGAGGCAGCA TTTACGACAC CTATGGCGAC AAGCACAGCC TGTTCCTCCA ATGCCTGCGA AGCTACACGG AAACCACGTT CGACGACTAC CTGAACGTGG CCGGGGAGTC GAAGTCGCCG ATTAAGGCGG TGGAAAAGAT CATCAAAAAG GCGGCGGTAC GGACGATCGG GGAGGAAAGG ACGTGTATGG GGGTGAGGTC GACGTTCGAA CTGGCTTCGG CAGATGAGGA AGTGCATGCG GTGCTGAAAG ACAACACCAC CAAACTGACC GCCCTGCTGA AAGATCTGCT CAAAAAAGCG CAAAAGGCGG ATGAAATCAG CAGCAAGCGC GACCCGGGCA TGCTGGCCCA TTTCATTGTA TCCAGCTTTG CGGGTTTCTG GCAGTTTTAC CTCGTGTATG GCGATGCGGA GCTGGTGCAC CAGCAAGCCG AGTTTTTAAT AAAATCGATC AAAAAATAA
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Protein sequence | MARSKAFEPE ERLEKAKCLF WQKGYNATSM QDLVETMGLN RGSIYDTYGD KHSLFLQCLR SYTETTFDDY LNVAGESKSP IKAVEKIIKK AAVRTIGEER TCMGVRSTFE LASADEEVHA VLKDNTTKLT ALLKDLLKKA QKADEISSKR DPGMLAHFIV SSFAGFWQFY LVYGDAELVH QQAEFLIKSI KK
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