| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3404 |
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| Symbol | |
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| ID | 8226983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4161212 |
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| End bp | 4162867 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931235 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003087779 |
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| Protein GI | 255037158 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.469336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATAC TTGATGTACT AAAAACCAAC GCCGGTTTAC ATCCAGATAA GCTTGCCTAC
GGATACATTG GCAAGGAGGG TGAAGTGACC GAGCAACTTC GTTACAGCGA ACTTCATCAG
CAAGTACTGG CTGCCTCTCA CCAACTGAGC GCCAAATTTC CCGTCAATGC GCGGGTGATT
TTGTTGCTGC CTGCCGAGGC TGCTTTCATT TGCTCCTTCC TGGGCACGCT GCATGCGGGC
ATTATCGCCG TGCCGACGCC CATCAGCTAT TCCGAGCCTG GCATTAACCG CATCCTCAGC
ATCATCCGTG ACTGCGACGC TGCGGGGATC ATTACCAATG CGAAGACGTA CAAAATGCTG
TTTCAGCGGA AAAACGATGC TTCTTCCGCA TTGCAGGAAT ACGACATCGA GTGGGTTTTC
ACAGACGACC TGATGGCTGC CCCCGCCGCT GCGGCAGCGG TGCGGAGGCA TAAGCAATCG
GTCGAAACGG CCTATTTGCA ATATACTTCC GGCTCCACCA GCCAGCCCAA AGGCGTGATG
ATCAGCCACC CGAACCTGAC CGCCAACTTA CGCGCCATCA ACAACTGCTT TGGCCGCACC
GCGGACGACA CTTCGGTTAC CTGGCTGCCG CATTATCACG ACATGGGACT TGTGGACGGG
CTTTTATCCC CGCTTTTCAC CGGCGGCACG GGCTACATCA TTTCCCCGCT GCTGTTCATT
ACCAAGCCCG CATTGCTCCT GCAAACGATC AGTAATTATC GGGCCGGCTT CTGCGGCGGT
CCGGGCTTCG GGCTCGACCA TTGCCTTGCG CGCATTCCGG AAGAACAGCT GCACGCATTG
GACCTCAGCT CATTGCGCGT CCTTTACGTA GGCGCCGAAC CGATCCGGAT CGCTACGCTC
GAACGGTTCG CAGCCGCCAC GCAAGCAGCC GGTTTCAGGA AAAACAGCCT GGTACCGTCC
TATGGCCTTG CCGAAGCAAC GTTGGCCGTG AGCCTGCATT TGAACGGCGT TGACTTGACC
TACCACAAAC TGGGCGATGC GGTCAACAAG GAAGTGGTAG CATGCGGCCC GCCCGTGGAA
TTCACGGAAG TGCAGATCGT GAACCCAACC AACGGGGTAG TATGCCCGAA TGGCCAGGAA
GGCGAAATTT GGGTAAAAAA CAGCGCGATT GCCGGCGGAT ACTGGGAAAA ACCAGAAGCT
ACAAAAGCGA CATTCCAGGC CTACACCAGC GATGGCAATG GTCCTTATTT GCGGACCGGC
GATTTAGGGT TTATGGAAAA CGGCCTTCTC TTCATCACAG GCCGCACCAA AGAGCTCATC
ATCATACGCG GAGTGAACTA TTACCCGCAG GATATTGAAG AAGTCGTAAG CGGAAGTCAT
CCGGACATTC AGCCTAATGC CTCGGCGGCA TTTTCGGTGG AAACGGAGCA AGGCGAAGCG
CTGATGATCG TGAGCGAAGT GCGCCGCGTG ACGCAGACAC CGGATGATGA AAAATCCATC
AAAACCAAAA TGGCCCAAAG TGTAGGATTG GCCTTTGGCC TCATTCCTCA CAATATTACA
CTCATCGCTC CCGGAAAACT GCCGAAAACA TCCAGCGGAA AGATCCAGCG ATTGAAAGCG
CGTGAGATTT TTGCCCGGAA AACAATTCTA GATTAA
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| Protein sequence | MDILDVLKTN AGLHPDKLAY GYIGKEGEVT EQLRYSELHQ QVLAASHQLS AKFPVNARVI
LLLPAEAAFI CSFLGTLHAG IIAVPTPISY SEPGINRILS IIRDCDAAGI ITNAKTYKML
FQRKNDASSA LQEYDIEWVF TDDLMAAPAA AAAVRRHKQS VETAYLQYTS GSTSQPKGVM
ISHPNLTANL RAINNCFGRT ADDTSVTWLP HYHDMGLVDG LLSPLFTGGT GYIISPLLFI
TKPALLLQTI SNYRAGFCGG PGFGLDHCLA RIPEEQLHAL DLSSLRVLYV GAEPIRIATL
ERFAAATQAA GFRKNSLVPS YGLAEATLAV SLHLNGVDLT YHKLGDAVNK EVVACGPPVE
FTEVQIVNPT NGVVCPNGQE GEIWVKNSAI AGGYWEKPEA TKATFQAYTS DGNGPYLRTG
DLGFMENGLL FITGRTKELI IIRGVNYYPQ DIEEVVSGSH PDIQPNASAA FSVETEQGEA
LMIVSEVRRV TQTPDDEKSI KTKMAQSVGL AFGLIPHNIT LIAPGKLPKT SSGKIQRLKA
REIFARKTIL D
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