Gene Dfer_3385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3385 
Symbol 
ID8226964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4141874 
End bp4142554 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content52% 
IMG OID644931216 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003087760 
Protein GI255037139 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.156891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTTC TGCAAGCACT TACTGACTCT ACTGCGGCTG CACCCGTCGC TGAGCAGGGC 
CTTTCCGTAA TCGATCTGCT CGCCAAAGGG GGGTGGGTAA TGTTGCCACT CGGGCTGTTG
TTCCTCGCCA CGCTGTTCCT GATCATCGAG CGTTTCCTCG GGATTGGCGC AAATGGTAGG
ATTGAGCCGC AATTTGTCGA TAATGTGAAA GATTTTATCC AGCAGGGTAA CCTGAAATCG
GCCGAGTCGC TTTGCAGAAA CCAGCGTAAT GCCGCAGGCC GCATTCTCGA AAGGGCGATC
GGCCGGATTG GCTATCCGAT CAAAGACATT GAAACGACTA TCGAAAACGC CAGCCAGATC
GAAATCCAGC GCATGGAGGG AAATTTGCCT TATCTCGGGG TGATCGCCGG TATTGCGCCG
ATGCTCGGTT TCGTGGGTAC GATCTCCGGT ATCATCCGTA TCTTCTACGA TATTTCGATT
TCCAATGACT TCAATATCAG CACCATTGCC GGTGGTATGT ATGAGAAAAT GATCACGTCC
GGCTCCGGTC TGATCATCGG TTTGATCGCC TACGCGGGTT ACCACTTGCT GAATATGAAG
ATCGACCGTT TTGCATTGCG CCTGCAAATG GCCGCGTCCG ATTTCCTGGA TGTGCTCCAA
AAGCCAGTTG CTGCAAAATA G
 
Protein sequence
MMLLQALTDS TAAAPVAEQG LSVIDLLAKG GWVMLPLGLL FLATLFLIIE RFLGIGANGR 
IEPQFVDNVK DFIQQGNLKS AESLCRNQRN AAGRILERAI GRIGYPIKDI ETTIENASQI
EIQRMEGNLP YLGVIAGIAP MLGFVGTISG IIRIFYDISI SNDFNISTIA GGMYEKMITS
GSGLIIGLIA YAGYHLLNMK IDRFALRLQM AASDFLDVLQ KPVAAK