Gene Dfer_3384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3384 
Symbol 
ID8226963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4141419 
End bp4141811 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content49% 
IMG OID644931215 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003087759 
Protein GI255037138 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.465252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAC GTCGGAAGAG CCGGTTTGCC CCGGAGGTGT TCACGCACTC GCTCAACGAT 
ATCATGTTCT TCCTGCTGTT GTTCTTTTTG ATCATCTCGA CGATGTCCAA TCCGAACGTG
ATCAAACTGA TGCTGCCCAA GGCATCGGCA ACGCAGCAGA TGTACAAAAA GCAGATTACC
CTGTCGGTTG ACGAAAATAA GGCCTATTTT ATCGATAAAG AGCCGATCCC TTTCGATAAT
CTGGAAACGC AGCTGCAAAG CATTTTTGCC GGCGTGGAGG AGCGCACCGT CGTTTTGAGA
GTCGATAAAA ACCTTGCCGT GCAGGATCTG GTGGATGTGC TCGAAATCGG GGCCAAGAAC
GATATCAAGA TGGTGATGGC TACCGCTAAA TAG
 
Protein sequence
MKIRRKSRFA PEVFTHSLND IMFFLLLFFL IISTMSNPNV IKLMLPKASA TQQMYKKQIT 
LSVDENKAYF IDKEPIPFDN LETQLQSIFA GVEERTVVLR VDKNLAVQDL VDVLEIGAKN
DIKMVMATAK