Gene Dfer_3358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3358 
Symbol 
ID8226937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4109786 
End bp4110955 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content48% 
IMG OID644931190 
Productglycosyl transferase family 2 
Protein accessionYP_003087734 
Protein GI255037113 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0515299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATGAAT ATGATAAAAT TTTACATCTC TCTTCTGTTG TGGCCGATTC TTTACTCTAT 
GCGCTGGGGG CGTTCGTAGC TGTTCAGTTA TTTTATTACC TCTTCTTTTT TACACGGCTT
GCATTTTACG GAAAGGGGGC AAATTATGGC AATGCCATGC CCGGAGTTAC CGTGCTCGTG
TGTGCGTGGA ACGAAAGGGA GAACCTGACT GAGCTCATTC CCTTGCTGGA TGCACAGGAG
TATCCCGAAT ACGAGGTAAT CCTGCTCGAC GACCGCTCCG ACGACGGAAG TGAAGATTAT
ATCCGCGAAA ACATCAATGG CTGGAAAAAC ATCCGCTACA TCCGCATCAA CGACCAGTTC
GACCACGTCA CTCCGAAGAA ATATGCTCTG ACCGTCGGCA TGAAGCAGGC CAAATATCCC
ATCGCGCTCA TGACCGATGC CGACTGCCGT CCCGCTTCAA ACCACTGGAT AACTGCGATG
ACCTCCCGGG TAACTCATGA CAAGGATATT GTGCTGGGTT TTTCTCCGTA TTTCAAACAA
AAAGGCCTGC TCAACTGGTT TATCCGCTGC GAAACCTTTT ACACGGCGGT TCAATACTTG
TCGTTCGCAT TGGCCGGCCT GACTTACATG GGCGTTGGGC GTAACATATT ATATAAGCGT
TCCGTATTTT TCGCCAACAA GGGTTTTTAT ACCCACAAGC ACGTGTTTGG CGGCGATGAC
GATATATTTC TAAACGAAGT ATCCACGAGC TCAAATACTA CCATCTCGAT TGAGGAAGAC
TCTTTCGTTT ACTCTGTTCC GAAAACCAAC TGGAAGGACT GGTTCCGTCA GAAACGCCGG
CACATTTCGG TGAGCCGTTA TTACAAACCC CGCAACAAAA TGCTGCTCGG AATGCTTTCC
GGCGCGCACA TTGCGACGTG GTTTCTTGGG TTGATCACCC TGGCGTGGGC GCTGATCGCC
AAAGATCAGT GGCTGCTCCA AGCCCTCGGC GTCGTGTTCG GCGTGCGGTG GGTCATTCAA
TGGTTCCTGC TGATCATTAT CAATATCAAG CTCGATAAAA CCGTGGAGTG GTTCAGCTTT
TTATTGATGG ACTTTGCACT TTTTGTTTAT TACCTCGTTT TCGGGTTTTT GACCATGACG
AGAAGAAAAC CCCGTAAATC ATGGAATTGA
 
Protein sequence
MHEYDKILHL SSVVADSLLY ALGAFVAVQL FYYLFFFTRL AFYGKGANYG NAMPGVTVLV 
CAWNERENLT ELIPLLDAQE YPEYEVILLD DRSDDGSEDY IRENINGWKN IRYIRINDQF
DHVTPKKYAL TVGMKQAKYP IALMTDADCR PASNHWITAM TSRVTHDKDI VLGFSPYFKQ
KGLLNWFIRC ETFYTAVQYL SFALAGLTYM GVGRNILYKR SVFFANKGFY THKHVFGGDD
DIFLNEVSTS SNTTISIEED SFVYSVPKTN WKDWFRQKRR HISVSRYYKP RNKMLLGMLS
GAHIATWFLG LITLAWALIA KDQWLLQALG VVFGVRWVIQ WFLLIIINIK LDKTVEWFSF
LLMDFALFVY YLVFGFLTMT RRKPRKSWN