| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3348 |
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| Symbol | |
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| ID | 8226926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4097737 |
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| End bp | 4099500 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644931179 |
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| Product | cytochrome c class I |
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| Protein accession | YP_003087724 |
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| Protein GI | 255037103 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.123322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTTT ATAAATTAAA ACGCACAGGA ATCCGGGCAT ATCTGGGCAT AGGGCTCCTG
GCGCTCGCAT TGGCCGGCGC AACGCATTTG CCGCACGATA CCCTGCCCGC CGGCGACGCC
GACCAGGGCG GCCTCACAAC GCCCGACGAT TTTGAAACGC TCGTGGTCGC CGACAGCACC
GGCCTTGCCC GGCACATTGT GGTGAATGAT AATGGCGACA TTTATATCAA ACTCCGCTAT
TTCGGCAAAG GGCAGGGCGG CGGCACCGTG GCGCTCAGGG ATACCAACGG CGACGGCCGG
GCGGATGTCA TGCGGAATTT CGGTAATTAC CAGGACCATA GCAGCCTCGC CAACGGGATC
ACCATTCACA ACGGATATCT TTATTACAGC TCCTCACTGG CTGTTTACCG CAGCAAGCTC
ATCCCCGGCC AGCTCCTGCC CGACGAAAAA ACAGAGCTCA TCCTGAAAGA TGACCACGAG
CACGGCCCGC ATTGGCATAT CACAAAACCA ATGGCCTTCG ACGACGCCGG GAATATGTAC
GTCCCGTTCG GCGCACCTTC GGATGCCTGC CAGGATATGG TGAACTCACC AGGCGGAAAA
CCCGGCAACC GCGGCGTGGA CCCGTGCCCC GAACTCGAAA AGCACGGCGG GATATGGAAG
TTCAGTGCCG ACAAGCCCAA CCAAACCCAG GCCGACGGCT CCTTGTATGC CACCGGCTTG
CGAAGTATCG TCGGAATGCG CTGGAATCCT GCGGACAAGA GCCTTTATGC GGTGGTGCAT
GGCCGGGATA ACCTCCATCG CCTGTTTCCG GGCCTGTTCA CGTCGTGGCA GAGCGCGGTG
CTCCCTGCCG AGGAATTTGT GAAAGTAACG CAGGGCACCA ACTCCGGCTG GCCGTATTAT
TACTACGATC AGATGAAAGG CCGGAAAATG CTCAATCCCG AATACGGAGG CGACGGTAAA
AAGGAGGGCG AGGGCGCGAA GTACCAGAAG CCGCTCATAG GGTTTCCGGG ACATTGGGCA
CCGAACGACG TACTTTTTTA TCAGGGCAGT CAATTCCCCG AACGATATAA AAATGGTGCA
TTCATTGCCT TCCACGGTTC CACCAACCGC GCGCCATATC CGCAGGCGGG TTACTTTGTA
GGCTTCGTGC CGTTCAAAAA TGGCGTTCCC TCGGGCGAAT GGGAGGTTTT CGCGGACGGT
TTCGCGGGCG TCGATCCGAT CATCAATGTA AGTGATGCGA AGTTCAGGCC GATGGGCCTC
GCCGAAGGCC CCGATGGCTC ATTGTACATC ACTGATTCGA AGGTGGGAAA GGTTTGGCGC
ATTATGTTCA AAGGGGATAG AAAGGCTTTT GGAACAAAAC AACTTGCCTC GATGGAACAG
CACAAGCTGC TGGCGCATAT CCGCACGCCC GACGAAGTGG CCGATAACCT CGATACCCAG
ACGAAGGAAC TCGGCCAGCG CATTTACAAC ACCTACTGCA CGCCCTGCCA TCAGCGCAAC
GGAATGGGCG ACGGCAGCCG GTTCCCGCCC CTCGGAGGCT CCGAATGGGT GACGGGCGAT
AAAAAGCGGC TGATCGAAGT CGTGGCCAAC GGCCTTGAAG GGCCCATCCA GGTTGCCGGG
AAGCCATATA ACGACCTGAT GCCACGCCAT GATTTCCTGA AAGCCGAGGA GCTGGCCCAG
GTGCTTACCT ACATCCGCAG GAGCTTCGGC AACGACGCCG GCCCGGTTTC GGCAGGCGAT
GTGAGGCAGG TATTGGGTAA ATAA
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| Protein sequence | MHFYKLKRTG IRAYLGIGLL ALALAGATHL PHDTLPAGDA DQGGLTTPDD FETLVVADST
GLARHIVVND NGDIYIKLRY FGKGQGGGTV ALRDTNGDGR ADVMRNFGNY QDHSSLANGI
TIHNGYLYYS SSLAVYRSKL IPGQLLPDEK TELILKDDHE HGPHWHITKP MAFDDAGNMY
VPFGAPSDAC QDMVNSPGGK PGNRGVDPCP ELEKHGGIWK FSADKPNQTQ ADGSLYATGL
RSIVGMRWNP ADKSLYAVVH GRDNLHRLFP GLFTSWQSAV LPAEEFVKVT QGTNSGWPYY
YYDQMKGRKM LNPEYGGDGK KEGEGAKYQK PLIGFPGHWA PNDVLFYQGS QFPERYKNGA
FIAFHGSTNR APYPQAGYFV GFVPFKNGVP SGEWEVFADG FAGVDPIINV SDAKFRPMGL
AEGPDGSLYI TDSKVGKVWR IMFKGDRKAF GTKQLASMEQ HKLLAHIRTP DEVADNLDTQ
TKELGQRIYN TYCTPCHQRN GMGDGSRFPP LGGSEWVTGD KKRLIEVVAN GLEGPIQVAG
KPYNDLMPRH DFLKAEELAQ VLTYIRRSFG NDAGPVSAGD VRQVLGK
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