| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3332 |
|---|
| Symbol | |
|---|
| ID | 8226910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4077156 |
|---|
| End bp | 4079627 |
|---|
| Gene Length | 2472 bp |
|---|
| Protein Length | 823 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644931163 |
|---|
| Product | DEAD/H associated domain protein |
|---|
| Protein accession | YP_003087708 |
|---|
| Protein GI | 255037087 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1201] Lhr-like helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACATTT TGACCAAATC CCGCGGACAT AGCATTGTTG AGCAATGGTT TAAAGATAAA
AAGTGGAAGT GGGCCGCTTT TCAGAAGGAG GCCGCGGCGG CTTACCTAGC GGGGAAAAGC
GGATTGGTGA ACGCTCCTAC GGGCAGCGGC AAGACCTACT CGCTCTGGCT GCCGATCCTG
ATCCGGCATA TCAATTCATT ACCCAAGAAG CCGTTGAAGA CCAAAAAGGG CCTGCAAGTC
CTTTGGATAA CGCCGCTACG CGCGCTTTCA AAGGATTTGT TCCGCAATAT GGAGATGGCT
GCGCTGGAAA TGAACCTTAC GTGGCGTGTG GGCATCCGTA CGGGCGATAC GGGCACACGC
GAGCGCAACG AGCAAAAAAA GCAAATGCCC GATGCCCTCA TTATCACGCC CGAGAGCCTG
CATATGCTCT TCACCCAGAA GAATGCCTCC GAATTTTTCA AAAACCTGCA TACGGTGGTG
GTGGACGAAT GGCATGAGCT CATGGGCAGC AAGCGCGGCA CGCAAACCGA GCTCGCACTG
GCCCGCCTCC GCACGATCAA CCCCGACCTT CAGACGTGGG GCATTTCCGC AACCATCGGC
AACCTTGAAG AAGCGCGGCA GGTGCTGCTG GGCATGCAGT TTCCGCAGGA AAACGCAGTG
ACGATCCGGG CCAATACCGA GAAAAAGATA TTGGTAGAAA GCATTATACC CGAACGGGTG
GAAACATTAC CGTGGTCGGG GTATATGGGC ATCAGGCTGG TGGATAAGGT GGTGGAGATC
GTGAACCAGA GCCGCACGAC GCTGCTTTTT ACCAATACGC GATCGGGCAC GGAGATCTGG
TACCGGACAA TCATCGAAAA ATACCCGGAG TTCGCCGGGA TAATGGCACT GCACCACGCC
TCGCTCGACC GGGAGATCCG CGATTGGGTG GAGGAGGCAT TGCACGACGA ACGATTAAAG
CTCGTCATTT GCACCGCCAG CCTCGATTTG GGAGTCGATT TTCGCCCCGT GGACACGGTG
ATCCAGGTGG GAAGCCCCAA AAGCATCGCG CGGTTTGTGC AGCGTGCCGG GCGGAGCGGA
CACCGGCCGG GCGTGGATAG CAAGATCTTT TTTTGTCCGA CCAATGCCCT GGAACTGATC
GAAGCGGTGT CGCTGCGGGA AGGCGTGCTC AAAAACATGA TCGAGGACCG TCCGCCGGTT
GCTCACGCAT TCGACGTGCT GGCTCAATGG ATGATCACGC TTGCCGTCGG AGAAGGGTTT
GATGAGGCGG AGCTTTTTGA AGAAGTACGC AGTGCTTATG GGTATCAATA CCTTAACCGG
GAGGAATGGG AATGGCTTTT GGGCTACATC ACGACCGGCA GTTCTTCACT CACTGTTTAT
GACGAATACA AGAAGGTAGA GCGCGTGAAT GGCCGCTACG TGGTGACGAG CCGCCGCATT
GCACACCGGC ATTTGCTCAG TATGGGGACG ATTGTTTCGG AGGTTTCGCT CAAAGTGAAG
CTCCAAAGCG GCAAATATCT GGGTGCGGTG GAGGAATCGT TTGTAACCTG GATGAAAACG
GGCGATGTGT TCTTCTTCGC GGGCATGAGC GTAGAATTTG TACGAATCCA TGAAATGACC
GTGACCGTCA AAAAAGCCGA TGGCAAAAAG GGCTTCCTCG TGCGCTGGGC CGGCGGGCGT
ATGCCGCTTT CCTCGCAACT GTCGGCATTC ATCCGCGAGC GCCTGGCCGA CGCCATTGAA
AATCCGCATA AAGAACTGGA ACTGGCCAAA ATGCAGCCGT TGCTCGAATT GCAGGCCAAG
CGCTCGGTTA TCCCCAAAAC CAACCAACTC CTGATCGAAC AATGCGAAAC CCGCGAGGGA
TATCATATAT TTATATTTCC GTTCGAAGGC CGGCTCGTGC ACGAGGGAAT GTCGATTCTG
CTCGCCTACC GCATCAGTCA GCTGCGACCG ATCACGTTCT CGGTGGCGAT GAACGACTAC
GGATTTGAAC TGTTGAGTGA TCAGTTTGTT GATATAGGTG AAATCCTCGG CGAAACCGAT
CTTTTTTCGA CCAAACACCT CGTGGACGAC ATTTACCAGA GCGTAAATGC GACGGAAATG
GCCAAGCGAA AATTCCGCGA GATCGCCGCG ATAGCGGGGC TGATGTTCCA GGGGTATCCG
GGGAAATACG TCAAAACCAG GCAATTGCAG GCATCCAGCT CGCTGTTATT TACTGTGATG
AGCAAATATG AGGACAACAA CTTGCTCATC AAGCAGGCAT ACCAGGAGGT TTTGACCTAC
CAGCTCGAAG AAGTGCGCAT GCGCGACGCG CTCGCCCGGA TCGAGCATCA GAAAATAGTG
ATACAACACA CCGACAGGCC CACGCCATTT TCATTTCCGA TCATGGTGGA CCGGCTTCGG
GAGCAATTAA CTTCGGAAAA ACTGGATGAC AGGATCCAGA GAATGATCAA ACAGTACAGT
AATGCAGATT GA
|
|---|
| Protein sequence | MNILTKSRGH SIVEQWFKDK KWKWAAFQKE AAAAYLAGKS GLVNAPTGSG KTYSLWLPIL
IRHINSLPKK PLKTKKGLQV LWITPLRALS KDLFRNMEMA ALEMNLTWRV GIRTGDTGTR
ERNEQKKQMP DALIITPESL HMLFTQKNAS EFFKNLHTVV VDEWHELMGS KRGTQTELAL
ARLRTINPDL QTWGISATIG NLEEARQVLL GMQFPQENAV TIRANTEKKI LVESIIPERV
ETLPWSGYMG IRLVDKVVEI VNQSRTTLLF TNTRSGTEIW YRTIIEKYPE FAGIMALHHA
SLDREIRDWV EEALHDERLK LVICTASLDL GVDFRPVDTV IQVGSPKSIA RFVQRAGRSG
HRPGVDSKIF FCPTNALELI EAVSLREGVL KNMIEDRPPV AHAFDVLAQW MITLAVGEGF
DEAELFEEVR SAYGYQYLNR EEWEWLLGYI TTGSSSLTVY DEYKKVERVN GRYVVTSRRI
AHRHLLSMGT IVSEVSLKVK LQSGKYLGAV EESFVTWMKT GDVFFFAGMS VEFVRIHEMT
VTVKKADGKK GFLVRWAGGR MPLSSQLSAF IRERLADAIE NPHKELELAK MQPLLELQAK
RSVIPKTNQL LIEQCETREG YHIFIFPFEG RLVHEGMSIL LAYRISQLRP ITFSVAMNDY
GFELLSDQFV DIGEILGETD LFSTKHLVDD IYQSVNATEM AKRKFREIAA IAGLMFQGYP
GKYVKTRQLQ ASSSLLFTVM SKYEDNNLLI KQAYQEVLTY QLEEVRMRDA LARIEHQKIV
IQHTDRPTPF SFPIMVDRLR EQLTSEKLDD RIQRMIKQYS NAD
|
|---|
| |