Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3332 |
Symbol | |
ID | 8226910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4077156 |
End bp | 4079627 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644931163 |
Product | DEAD/H associated domain protein |
Protein accession | YP_003087708 |
Protein GI | 255037087 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACATTT TGACCAAATC CCGCGGACAT AGCATTGTTG AGCAATGGTT TAAAGATAAA AAGTGGAAGT GGGCCGCTTT TCAGAAGGAG GCCGCGGCGG CTTACCTAGC GGGGAAAAGC GGATTGGTGA ACGCTCCTAC GGGCAGCGGC AAGACCTACT CGCTCTGGCT GCCGATCCTG ATCCGGCATA TCAATTCATT ACCCAAGAAG CCGTTGAAGA CCAAAAAGGG CCTGCAAGTC CTTTGGATAA CGCCGCTACG CGCGCTTTCA AAGGATTTGT TCCGCAATAT GGAGATGGCT GCGCTGGAAA TGAACCTTAC GTGGCGTGTG GGCATCCGTA CGGGCGATAC GGGCACACGC GAGCGCAACG AGCAAAAAAA GCAAATGCCC GATGCCCTCA TTATCACGCC CGAGAGCCTG CATATGCTCT TCACCCAGAA GAATGCCTCC GAATTTTTCA AAAACCTGCA TACGGTGGTG GTGGACGAAT GGCATGAGCT CATGGGCAGC AAGCGCGGCA CGCAAACCGA GCTCGCACTG GCCCGCCTCC GCACGATCAA CCCCGACCTT CAGACGTGGG GCATTTCCGC AACCATCGGC AACCTTGAAG AAGCGCGGCA GGTGCTGCTG GGCATGCAGT TTCCGCAGGA AAACGCAGTG ACGATCCGGG CCAATACCGA GAAAAAGATA TTGGTAGAAA GCATTATACC CGAACGGGTG GAAACATTAC CGTGGTCGGG GTATATGGGC ATCAGGCTGG TGGATAAGGT GGTGGAGATC GTGAACCAGA GCCGCACGAC GCTGCTTTTT ACCAATACGC GATCGGGCAC GGAGATCTGG TACCGGACAA TCATCGAAAA ATACCCGGAG TTCGCCGGGA TAATGGCACT GCACCACGCC TCGCTCGACC GGGAGATCCG CGATTGGGTG GAGGAGGCAT TGCACGACGA ACGATTAAAG CTCGTCATTT GCACCGCCAG CCTCGATTTG GGAGTCGATT TTCGCCCCGT GGACACGGTG ATCCAGGTGG GAAGCCCCAA AAGCATCGCG CGGTTTGTGC AGCGTGCCGG GCGGAGCGGA CACCGGCCGG GCGTGGATAG CAAGATCTTT TTTTGTCCGA CCAATGCCCT GGAACTGATC GAAGCGGTGT CGCTGCGGGA AGGCGTGCTC AAAAACATGA TCGAGGACCG TCCGCCGGTT GCTCACGCAT TCGACGTGCT GGCTCAATGG ATGATCACGC TTGCCGTCGG AGAAGGGTTT GATGAGGCGG AGCTTTTTGA AGAAGTACGC AGTGCTTATG GGTATCAATA CCTTAACCGG GAGGAATGGG AATGGCTTTT GGGCTACATC ACGACCGGCA GTTCTTCACT CACTGTTTAT GACGAATACA AGAAGGTAGA GCGCGTGAAT GGCCGCTACG TGGTGACGAG CCGCCGCATT GCACACCGGC ATTTGCTCAG TATGGGGACG ATTGTTTCGG AGGTTTCGCT CAAAGTGAAG CTCCAAAGCG GCAAATATCT GGGTGCGGTG GAGGAATCGT TTGTAACCTG GATGAAAACG GGCGATGTGT TCTTCTTCGC GGGCATGAGC GTAGAATTTG TACGAATCCA TGAAATGACC GTGACCGTCA AAAAAGCCGA TGGCAAAAAG GGCTTCCTCG TGCGCTGGGC CGGCGGGCGT ATGCCGCTTT CCTCGCAACT GTCGGCATTC ATCCGCGAGC GCCTGGCCGA CGCCATTGAA AATCCGCATA AAGAACTGGA ACTGGCCAAA ATGCAGCCGT TGCTCGAATT GCAGGCCAAG CGCTCGGTTA TCCCCAAAAC CAACCAACTC CTGATCGAAC AATGCGAAAC CCGCGAGGGA TATCATATAT TTATATTTCC GTTCGAAGGC CGGCTCGTGC ACGAGGGAAT GTCGATTCTG CTCGCCTACC GCATCAGTCA GCTGCGACCG ATCACGTTCT CGGTGGCGAT GAACGACTAC GGATTTGAAC TGTTGAGTGA TCAGTTTGTT GATATAGGTG AAATCCTCGG CGAAACCGAT CTTTTTTCGA CCAAACACCT CGTGGACGAC ATTTACCAGA GCGTAAATGC GACGGAAATG GCCAAGCGAA AATTCCGCGA GATCGCCGCG ATAGCGGGGC TGATGTTCCA GGGGTATCCG GGGAAATACG TCAAAACCAG GCAATTGCAG GCATCCAGCT CGCTGTTATT TACTGTGATG AGCAAATATG AGGACAACAA CTTGCTCATC AAGCAGGCAT ACCAGGAGGT TTTGACCTAC CAGCTCGAAG AAGTGCGCAT GCGCGACGCG CTCGCCCGGA TCGAGCATCA GAAAATAGTG ATACAACACA CCGACAGGCC CACGCCATTT TCATTTCCGA TCATGGTGGA CCGGCTTCGG GAGCAATTAA CTTCGGAAAA ACTGGATGAC AGGATCCAGA GAATGATCAA ACAGTACAGT AATGCAGATT GA
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Protein sequence | MNILTKSRGH SIVEQWFKDK KWKWAAFQKE AAAAYLAGKS GLVNAPTGSG KTYSLWLPIL IRHINSLPKK PLKTKKGLQV LWITPLRALS KDLFRNMEMA ALEMNLTWRV GIRTGDTGTR ERNEQKKQMP DALIITPESL HMLFTQKNAS EFFKNLHTVV VDEWHELMGS KRGTQTELAL ARLRTINPDL QTWGISATIG NLEEARQVLL GMQFPQENAV TIRANTEKKI LVESIIPERV ETLPWSGYMG IRLVDKVVEI VNQSRTTLLF TNTRSGTEIW YRTIIEKYPE FAGIMALHHA SLDREIRDWV EEALHDERLK LVICTASLDL GVDFRPVDTV IQVGSPKSIA RFVQRAGRSG HRPGVDSKIF FCPTNALELI EAVSLREGVL KNMIEDRPPV AHAFDVLAQW MITLAVGEGF DEAELFEEVR SAYGYQYLNR EEWEWLLGYI TTGSSSLTVY DEYKKVERVN GRYVVTSRRI AHRHLLSMGT IVSEVSLKVK LQSGKYLGAV EESFVTWMKT GDVFFFAGMS VEFVRIHEMT VTVKKADGKK GFLVRWAGGR MPLSSQLSAF IRERLADAIE NPHKELELAK MQPLLELQAK RSVIPKTNQL LIEQCETREG YHIFIFPFEG RLVHEGMSIL LAYRISQLRP ITFSVAMNDY GFELLSDQFV DIGEILGETD LFSTKHLVDD IYQSVNATEM AKRKFREIAA IAGLMFQGYP GKYVKTRQLQ ASSSLLFTVM SKYEDNNLLI KQAYQEVLTY QLEEVRMRDA LARIEHQKIV IQHTDRPTPF SFPIMVDRLR EQLTSEKLDD RIQRMIKQYS NAD
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