Gene Dfer_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3330 
Symbol 
ID8226908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4075279 
End bp4076439 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content51% 
IMG OID644931161 
ProductAAA+ superfamily protein 
Protein accessionYP_003087706 
Protein GI255037085 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCAC GAAATGCAGC TTCAAAAATC GACCAGCTGG CATCGGTTTT CAAATCCGTA 
GCCATTACGG GTCCGCGCCA ATCGGGGAAA ACGACGCTGG CAAAGTCGCT TTTTCCTGAT
AAAACTTACC TGTCACTTGA AAATCCGGAT GTTCGCCGGT TTGCATTGGA AGATCCGCGC
GGGTTCCTTT CGAGGTACCA ATCCGGCGCG GTTTTCGACG AAGTGCAGCG AGCGCCCGAG
CTTTTTTCCT ACTTACAGGA AATCCTGGAC GAATCGCCCG AACCAGGCCG CTTCATCCTG
ACCGGCTCCA ACAACTTTTT ATTGCAGCAA AATATTTCAC AAACCCTCGC CGGACGTGTT
GCCATTCTAA ATCTGTTGCC GTTCAGCACG GAAGAGCTAT TTGCAGAGCT GGGCAATGTG
CCGGACGAAA ACGAGCTGAT ATTCAACGGG CTTTATCCGC CAATTTACGA GCCCGGTATC
CCGCCTGCCG ACTGGTTTCC GAATTACCTG CGCACCTACA TTGACCGCGA CGTACGGCAA
ATCAAAAATA TTACCGATCT CATTGTCTTC GAAAGGTTCG TCAGATTGCT GGCCGGTCGG
AATGGGCAGG AGCTTAACCT TACGTCGCTG GCCGTCGACA CCGGCGTGGA CACGAAAACC
GTGCAGTCGT GGATTGGCAT TCTCGAAAGC AGTTTTATTA TCTATCTGCT GCGGCCGCAT
TATAAAAACT TCAACAAAAC CCTCGTCAAG CGGCCCAAAG TGTATTTTTA TGATACCGGG
CTTGTCTGTT CTCTATTGGG TATTTCCAAT GCGGGACAGG TTGCGCTTCA CCCTTTGCGA
GGTGCGCTCT TCGAATCGCT CGTGGTTACC GAGCTCGTCA AACAGCGCAC GAACGCGGGT
AAACTCGTAA ATCTCTATTA TTGGCGGGAC AAAACCGGCC ATGAGGTGGA TATTATTGTT
GATAATGGGT TGTCGTTGAT CCCCGTTGAA ATCAAAGCCG GCAAGACCGT GAATAACGAA
TTTTTCAGCA ATATGACTTA CTGGAACAAA CTGAGCGGGG CCCAAACCGG CTACATTGCC
TACGCCGGTA ACCAGACGGA GGAGCGCTCG AATGGGATCA ACGTTCTGAA TTGGTTTGAG
TTGCTGCGAC GGAATGTTTG A
 
Protein sequence
MIARNAASKI DQLASVFKSV AITGPRQSGK TTLAKSLFPD KTYLSLENPD VRRFALEDPR 
GFLSRYQSGA VFDEVQRAPE LFSYLQEILD ESPEPGRFIL TGSNNFLLQQ NISQTLAGRV
AILNLLPFST EELFAELGNV PDENELIFNG LYPPIYEPGI PPADWFPNYL RTYIDRDVRQ
IKNITDLIVF ERFVRLLAGR NGQELNLTSL AVDTGVDTKT VQSWIGILES SFIIYLLRPH
YKNFNKTLVK RPKVYFYDTG LVCSLLGISN AGQVALHPLR GALFESLVVT ELVKQRTNAG
KLVNLYYWRD KTGHEVDIIV DNGLSLIPVE IKAGKTVNNE FFSNMTYWNK LSGAQTGYIA
YAGNQTEERS NGINVLNWFE LLRRNV