| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3283 |
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| Symbol | |
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| ID | 8226861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4028431 |
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| End bp | 4030170 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931115 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003087660 |
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| Protein GI | 255037039 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.355716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTCG GCCTGAGCTT CTCCTGCTCC GACGATTTCT TCGATCTGAA ACCCCAGGGG
CGCGCGTCGC TAGATCAGCT AAGCAATAAA AATGGTGTGA ATGCCCTCCT GATCGGCGCA
TACTCACTGC TTGATGGCGT GGGCGCGGGT AACACCGGCC GCCAGTCGAC CATCTCCAAC
TACGTTTTCG GTGGAATCAG CAGCGACGAC GCCGTGAAAG GCACCGACGC CGGCGACCAG
CCCGAACAGT CGTTTATTGA ACAATACAAC TGGCTTTCGG ACAACACCTA TTTCCTCGGT
AAATGGTGGC ATTCCTACGA CGGCGTTGCC CGCGCGAACG AAGTAATCCA GATCGCAGGC
AACCCGAATG TGAAAGACAT GTCCGACGCC GAAAAAATCC AGGTGGTGGC AGAAGCACGT
TTCCTCCGCG GACACTATCA TTTTGAGGCC AAAAAAATGT GGAACAATGT GCCTTTTATC
GACGAGAAGA TCTACAATGC AGGTGATCCC AACTCGACCA AAGTGCCCAA CACGGAGGAT
ATCTGGGCGA AAATTGAAGC GGATTTCCAA TTTGCGGCGG ACAACCTGCC TGTAACGCAG
GCTCAGAAAG GCCGTGCAAC ACAATGGGCG GCCAAGGCTT ACCTGGCGAA GGCCTACCTA
TTCCAGAAAA AGTGGGATAA AGCGAAAGTG CTGCTGGATG ATGTCGTCAA AAATTCGGGC
AAGAAACTGG TAGCGAACTA CCACGACAAC TACCGCACAA CCGGCAACAA CAACAGCGAA
TCGATCCTGG AAGTGCAGTT TTCGGTAAAT GACGGCACCA ATGGTAACAA CGGTAATGCT
GGCGACAACC TGAACTGGCC GTATTCAGCT GGCGCACCGG GACGTGGCTG CTGCGGTTTC
TACCAGCCTT CTCACAACCT TGTGAATGCA TTTAAAACCG AAAACGGACT TCCGATGATC
GGTAATGCAG CGGATGGAAC ACTGGATACT TACAACAAAG TAGATTTGCC GAACGATCAG
GGAATTGTAG CCTCGGCGGC ATTTACATTG GACAAAACGG TTCCCGTTGA CCCCCGCCTC
GACTGGACCG TCGGTCGCCG CGGTGTGAAC TTCCTCGACT GGGGCCCGAT GCCCGGCTCG
ACCTGGATTC GCGACCAGGC ATATGCAGGT CCATTCACCG GTAAAAAATG GATGTACTAC
CTGGCCGAAG AAAACAGCAC AACCCACTCC ACCAGCAAAC GGAACGTGAA TAATAACTAC
CGTTTGATCA AACTGTCGCA CGTGCTGCTG TGGCTGGCCG AATGCGAAGT AGAACTGGGC
AACCTGGCCA CCGCGCAGGA TTTGGTAAAC CAGATCCGCA ACCGCGCGAA AACCGGTTCG
GTGCAGGACG AAAGCGTGAC CTACAAAGTG GAGCCTTATC CTGCGGGAAC ATTCGCTTCC
AAAGGTGCCG ACTTCGCCAG AAACGCGGTG CGCATGGAGC AGCGCCTCGA ATTTGCGATG
GAAGGTCACC GCTTCTTCGA CCTCGTTCGC TGGGGCATTG CCGAGAAAGT ATTGAACAAA
TATGCTGCGG AAGAGGCCGT GCCGGGCAAA GAGCCATCGG GACGGGTGTT CAACAAGCGG
GGTTATATGG CAGGTAAAAG TTTCACACAG AAAAACCTGT ATTTCCCGCT GCCACAGGAC
GAAATCCTCA ACAGCCAGAA AGACGGCAAA CCTACTTTGA CACAAAATCC CGGATATTAA
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| Protein sequence | MLVGLSFSCS DDFFDLKPQG RASLDQLSNK NGVNALLIGA YSLLDGVGAG NTGRQSTISN
YVFGGISSDD AVKGTDAGDQ PEQSFIEQYN WLSDNTYFLG KWWHSYDGVA RANEVIQIAG
NPNVKDMSDA EKIQVVAEAR FLRGHYHFEA KKMWNNVPFI DEKIYNAGDP NSTKVPNTED
IWAKIEADFQ FAADNLPVTQ AQKGRATQWA AKAYLAKAYL FQKKWDKAKV LLDDVVKNSG
KKLVANYHDN YRTTGNNNSE SILEVQFSVN DGTNGNNGNA GDNLNWPYSA GAPGRGCCGF
YQPSHNLVNA FKTENGLPMI GNAADGTLDT YNKVDLPNDQ GIVASAAFTL DKTVPVDPRL
DWTVGRRGVN FLDWGPMPGS TWIRDQAYAG PFTGKKWMYY LAEENSTTHS TSKRNVNNNY
RLIKLSHVLL WLAECEVELG NLATAQDLVN QIRNRAKTGS VQDESVTYKV EPYPAGTFAS
KGADFARNAV RMEQRLEFAM EGHRFFDLVR WGIAEKVLNK YAAEEAVPGK EPSGRVFNKR
GYMAGKSFTQ KNLYFPLPQD EILNSQKDGK PTLTQNPGY
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