| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3276 |
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| Symbol | |
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| ID | 8226854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4015257 |
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| End bp | 4016180 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931108 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_003087653 |
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| Protein GI | 255037032 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.541396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATAA AAATAGGAAC CCGCGGGAGC AAGCTGGCAC TTTGGCAGGC GTATTATGTC
GAAGAATTGT TGCAGCGAGG CGGTGTGGAA ACGGAAATCG TTATCATTGA AACCAAAGGC
GATAAAATTC TCGACCGGTC GCTTTCAAAA ATCGGAAGCA AAGGCGTGTT TACCGAAGAG
CTGGAAGATC AGCTCCGCAG CGGCGACATT GATATTGCCG TGCATAGCGC CAAAGACCTG
CAATCGCATC TCGATGACGC ATTCGAAATC ATCGCTTTCA CCGAACGCGA GCAGGCGAAC
GACGTTCTGG TAAGCCACGA TACGACATTA TCCCTTAAAA GCGGCGAATC GTTTACAGTG
GGAACATCGT CCACGCGCCG GGTAGCAGTT TTGAAACATT ATTACCCGCA TATCAAAACG
GTAGATATGC GCGGTAACCT GCAAACCCGC CTTCGCAAGC TTGAAGAAGG CCAATGTGAC
GCACTGCTGC TGGCTTTTGC CGGCGTGCAC CGGATGGAGT ACGACGATAA AATAGCCGAA
CATTTGCTCC TCGACGAGTT TACCCCAGCC GTAGGACAGG GCAGCGTGGC CATTGAAACC
GCCGTGGCGC TCGATCCCGC AAAGAAAAGC AAGCTCCGCG AGCTACTTAA CAACGAGCAT
ACCGAAACGT GCCTGCTCGC CGAAAGGGCA TTTCTGAAAC GTCTTCAGGG CGGTTGCAGC
ATCCCGGTCT TCGGGATGGC AACGCTTCAC GAAGATGAAA TCCGCATGAC CGGCGGCATC
ATCAGCCTCG ACGGCACCGA ATTGATCCGC AAAACCGAAA CCGGCGCCAC CGCATTTCCG
CAGGAACTGG GGACCGCATT GGCCGAGGAG TTGCTCGCTG CCGGGGCGGA CCGGATTTTA
CAAACGATCA GGAACCATAT CTGA
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| Protein sequence | MHIKIGTRGS KLALWQAYYV EELLQRGGVE TEIVIIETKG DKILDRSLSK IGSKGVFTEE
LEDQLRSGDI DIAVHSAKDL QSHLDDAFEI IAFTEREQAN DVLVSHDTTL SLKSGESFTV
GTSSTRRVAV LKHYYPHIKT VDMRGNLQTR LRKLEEGQCD ALLLAFAGVH RMEYDDKIAE
HLLLDEFTPA VGQGSVAIET AVALDPAKKS KLRELLNNEH TETCLLAERA FLKRLQGGCS
IPVFGMATLH EDEIRMTGGI ISLDGTELIR KTETGATAFP QELGTALAEE LLAAGADRIL
QTIRNHI
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