Gene Dfer_3262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3262 
Symbol 
ID8226837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3994747 
End bp3996054 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content53% 
IMG OID644931091 
Producthypothetical protein 
Protein accessionYP_003087639 
Protein GI255037018 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0112416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG ACGCGGACCG GACGCAGCAT GATATTTCAA GAAGATCCTT TTTAAAAAAC 
ACTGCCGGTA CGGTTGCATT GTCGATGGCT GGCGGCGTTT CGGCAGCCGC TGCGGCGCCG
GTTTTTAATG CAGATCGTAT CCAATCTCTT TCTATGGCAT CAGAAAAAAG CCTTATCGGC
GCCTATGGCC CCTGGGCGGC CTCATTGCTT CCTGCGCAGC CTCCCCTTTC CTTTCGAAAT
AAGAAATGGA CGAATATCGA TGCCTGGCGG AAAGAGGCTT TGGAAAAAAC GAAAGAACTG
GTGTCGGCTC CGGCCAAACC TGCATTGCCA AAGGTTACCG TTAAGCGGAA GTACACTTAT
GACGGGCTGG AAATAGAAGA ACTTTCATGG CAGCTGCCCT ACGGCCGGCC TACCGAGGCA
GTTTTGCTCA AACCGGCCGG TGTTACCAAG CCGTTGCCGG GCATTCTTGG GCTGCACGAC
CATGCAGGTA TGAAATATTT CGGGCTAAGG AAAATCGTGA AAACGTCAGA CGACCTACAC
CCGATGTTGA AAGAACATCA GGACAAGGAC TACGGCGGAA AAGCCTGGGC GAACGAGATC
GCGAAGCAGG GCCACGTGGT GTTGGTGCAC GATACCTATG CATTTGGCAG CCGCAGGGTG
TTTTATGAAG ATACACAAGG GCTGGACTGG GGCGCGGTGG GCACCAAAGG CAAATCGGAC
GCAGACCCCG AAAAGGCCGA GAACATCCGG GCTTACAATG AATGGTCGTC GGAGCACGAG
CATGTGATGT CCAAATCGCT GTTTTCGGCC GGTACTACCT GGCCAGGTGT GTTTCTGACG
GAAGATCAGG TGGCGCTCGA TATCCTCGCC GACCGGAAAG AAGTGGATGC GAACCGCCTC
GGCTGCGGCG GATTATCGGG CGGCGGTCTG CGGACGGTGT ACCTGGCCGG CCTCGATACG
AGGGTTAAGT GCGCCGTTTG TGTCGGTTTT ATGACTACCT GGAAGGACCT GGTGTTGAAC
AGATCGTTTA ACCACACCTG GATGACGTAC ACTCCGTTGC TCCCCAAATA CCTCGATTTT
CCAGAGATTC TGGGCCTAAG AGCTCCATTA CCGACATTGG TTTTGAACAA TAACCAGGAC
GAACTGTACA CGCTTCCTGA AATGAAGCAG GCCGACACGA TCCTGACGGA GGTTTTCAAA
AAAGCAGGCG CGTCAGATAA ATACAAAGCC AGTTTCTACG ACGGGCCCCA TAAGTTTGAC
GCCGATATGC AGAAAGAGGC CTTCGAATGG TTCAGGAAGT GGCTTTGA
 
Protein sequence
MKTDADRTQH DISRRSFLKN TAGTVALSMA GGVSAAAAAP VFNADRIQSL SMASEKSLIG 
AYGPWAASLL PAQPPLSFRN KKWTNIDAWR KEALEKTKEL VSAPAKPALP KVTVKRKYTY
DGLEIEELSW QLPYGRPTEA VLLKPAGVTK PLPGILGLHD HAGMKYFGLR KIVKTSDDLH
PMLKEHQDKD YGGKAWANEI AKQGHVVLVH DTYAFGSRRV FYEDTQGLDW GAVGTKGKSD
ADPEKAENIR AYNEWSSEHE HVMSKSLFSA GTTWPGVFLT EDQVALDILA DRKEVDANRL
GCGGLSGGGL RTVYLAGLDT RVKCAVCVGF MTTWKDLVLN RSFNHTWMTY TPLLPKYLDF
PEILGLRAPL PTLVLNNNQD ELYTLPEMKQ ADTILTEVFK KAGASDKYKA SFYDGPHKFD
ADMQKEAFEW FRKWL