Gene Dfer_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3250 
Symbol 
ID8226825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3983984 
End bp3984727 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content52% 
IMG OID644931079 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003087627 
Protein GI255037006 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.176315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCT ATATGAATCT ACACCGGAAA ACTTTGGTAT TACTACATGG TCATGGCATA 
GACGACACGA TTTGGGACAG CCTCGATGCT GCGATAAATG ACACTTACAC GGTAGTGAGA
CCGAATATTT CGCTCTTCAC ATCCTGCCAG ACCGTGGAGG AGTATGCCGA TGAACTTCAC
CGTTTCCTGA CCAACGCCAA TATCCAGAAA TGCACGCTGA TCGGCCATTC GATGGGCGGC
TACATTTCGC TGGCATTCGC CGAAAAATAC ATGGATATGC TCGAAGGCTT CGGGCTGTTC
CATTCCACCG CCTACGCCGA CGACGATTCC AAAAAGCACC AGCGCGGCCA GATGATCGAC
CTCCTGCGCA ATTATGGCAC TGAGTCGTTT ATCAAAAATA CAGCGTCCAA TATGTTCGGC
GAGCGCTACA AGGAGCTTTA TCCCGAGCGT ATCAAAGAAC ACATTGCCTA TTTCAGCAAG
CTTCCCGCCG AAGCGCTGAT CGCCGGAATG AATGCGATGC GCCAGCGCCC CGACCGCACG
TCGGTGCTGG CGGGCATGCC GTTTCCGGTA TTGTTCATCA TCGGTATGCA GGACAAGCTC
ATCCACTTCG AAAGCGTGAT CGAGCTGGCC GAATACCCGA AAAAAGCTTA CCCCTTGATC
TTCGCCGAAG CCGGGCATAT GGGCATGGTG GAGCGCCCCG ACGCGACCGC CAGGATGATC
AACTGGTACA TGAGCAAAAT TTAA
 
Protein sequence
MQIYMNLHRK TLVLLHGHGI DDTIWDSLDA AINDTYTVVR PNISLFTSCQ TVEEYADELH 
RFLTNANIQK CTLIGHSMGG YISLAFAEKY MDMLEGFGLF HSTAYADDDS KKHQRGQMID
LLRNYGTESF IKNTASNMFG ERYKELYPER IKEHIAYFSK LPAEALIAGM NAMRQRPDRT
SVLAGMPFPV LFIIGMQDKL IHFESVIELA EYPKKAYPLI FAEAGHMGMV ERPDATARMI
NWYMSKI