| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3210 |
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| Symbol | |
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| ID | 8226785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3931076 |
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| End bp | 3937153 |
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| Gene Length | 6078 bp |
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| Protein Length | 2025 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931040 |
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| Product | alpha-2-macroglobulin domain protein |
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| Protein accession | YP_003087588 |
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| Protein GI | 255036967 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.150247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAG CGTACACCTT CGGTTACTAT CTGATCATCA CCATTATTAT ATCATTAACT
ATGCACACCT ACGGACAGGG TTCATTGAAG AACTACGATA GCGAGTGGAA GAAAGTCGAA
GCGCTCGCGG GCAAGGGGCT TGCCAAAGAT GCATTGGCAC AAGTGAAGGA AATATATGCG
CAGGCCAAAA AGGATAAGCA GGACGCGCAG CTGATCAAAG CGGCGTTGTA CATGACGGAA
TTGCAGGCGG AAAACCGCGA GAACAATGCC ACCGCAGCCA TACAGGAACT GGAAAAGGAA
ATGGCCGGCG CCACAGGCCC CGCACGGTCG ATCCTGGCTA GCCTGGTGGC TTCCGAATAT
TACAACTATT ACCAAACGAT CAGATGGCAG CTCTACAATC GCACGGCTAC TGTCGCTTTC
GAAAAAGCCG ATGTGGCAAC CTGGGGCACG GAGGATTTTC ACCAGCGAAT CGGAGCATTG
TTCCTCCAAT CCATTGAGAA TGAAGCTGCA TTGAAGCCAA CCAGGCTGGA CCCGTACGAC
GCGATCATTA CCAAAGGCAA CATGCGCAAA CTGCGCCCTA CCCTGTTCGA TTTGCTGGCA
TTCAGGGCAT TGGAATATTT CTCTTCCGAC GAACGTGAGA TTAAAAGGCC TGCATATGCA
TTCGAAATCA ACACGGCATC CGCGTTCGAT CCCGCGGCGG ATTTTGTGCA CAGGAAGTTT
GAAACCAAAG ATTCGGCTTC TCTGGAACAT CACGCGCTGC TGCTCTACCA GAAACTGATC
GCATTCCACC TCGAAGATAA AGACCCCGCC GCATTGATCG ACGCCGACCT GGCGCGGCTG
CAATATGTGC GTCAGAAATC GGTACACCCT GATCAGAGCG AGCTGTATTT TATGGCTGTC
AGCCACGTTG CGGACCAATA TCAGTCAACA CCGGCAGCGG CGCAGGCGTG GTACCTCAAA
GCGGCCTGGC TGAATGAAAA GGCGGATGCC TACCAGCCCG GCAAAGATTC TACGGCCAGA
TTCGAAAGAG TGAAGGCCGC CGAGATTTGC CAGCGGATCA TGCGCGAAAA CCCGGAGACG
GAAGGGGGCG CTAATGCATT TAACCTTCAC AAATTAATCA ACCACAAATC CCTTGTATTT
TCAATCGAAG CGGTAAACAG CGATTCCAGG CCATTCCGCG TGTTTGTACG ATACCGGAAT
TTCGACAAGC TGCATCTCCG CGTGCTCAAA GCGACGGAGG TATTGCGGAA AGCATTGGAA
AACAACGAAG AAAGCGAAAA GTGGAGCACA TTAGCCAAGC TTCAATCCGT AAAATCCTGG
GAACAGCCGC TTCCCGACAC CCGCGATTTC CAGCAGCATT CGGTGGAGAT CAAGGCCGAT
GGGCTGCCTG CCGGTGAATA CCTGCTCCTC GCCAGCTCCG ACCCTGCTTT CCATAACACC
AATGCAGCCC TCGGCGCGGC GGTCTTTTAC GTTTCCGACA TCAGCTATAT TCAAAAAGAG
AGCGATCTGT TCGTGCTGAA CCGTGAAAAC GGCGCGCCGC TGGCCGGTGC CAAAGTGCAA
CTCTGGGAAA GACGCTATGA CTATAACACC CGAACCAATG TCAAAAGCAA AACCGCATTG
CTGACCACCG ATGCGAACGG ACATTGCACG GTTCCGGCGC TCCAGAGAGA TAACTACGGA
ACGCAGCGCC TCCTGGAAGT CACGCACGAG AACGACAGAC TGTTTGTCCA GGAGAATGTA
AACCAATATT ACTATTACAA CGAGCAGCCA GAAACCGAAC ACGATAACGT GGCAGAAGAT
ATTTACCTGT TCACCGACAG GAGCCTCTAC CGCCCAGGAC AGACGGTTTA TTACAAAGGC
ATTGTCCGAA AAGGCGAGAG CGTCCTCCGC AACCAGCAGG AGGAATTTAC GGCCGCACTT
TACAATGCGA ACGGCGAGCA TGTGGCCGAG GCCAGGCACC GCGTGAATGC GTATGGAAGC
TTCTCCGGTT CATTTGCGGT ACCGGGCAGC GGGCTTACGG GCAGTTTTCA CATCCGGGTG
AGGGACAATT CCCGCGTTAA TTTTCAGGTG GAAGAATACA AACGTCCCCG GTTCGCAGTG
GAGTTTGATA CGCTGAAAGC GGCCTACAAA GTAAACGAGC AAATACAAGT AACCGGAAAA
GCGAGCGCTT ATGCGGGCAA CGCCATTGAT GGGGCAACGG TAAAATACCG CGTCGTGCGC
AAGCCGAGGC TGTTATATAC GGGGCTGCTC AAACGCTGGT GGGCACCCGA AGAGCTGATG
GAAATTGCAC ATGGCGAAGC CGCCACCGAT GCATCCGGCC GGTTTCAGGT CAGTTTCGAA
GCAATTCCCG ACCGGAGAGT GAATGTAAAA CTCGACCCGC TTTTCGACTA CACCGTCTAC
GCGGACGTGA CCGATAGTAA CGGAGAAACA AGAAGTGCGC AAACGAACGT GACCGTGAGC
TACAAATCGT ACGTGCTCAA AACCGAAATT CCGTCGGTAA TAGACGTGCA GAACGCCAGG
TCACTGTCGA TCCGCACCGA AAACCTCGCG GGAGCATTTG TACCGGCGGA AGCGAGCATT
CAGTTTACTA GGATTGAGCC GGAAAAGCGG CTGATCAGAA AGCGCTACTG GGGGCACCCC
GATCTTTTTG TTTTATCCAA AACAGCATTT GTAGCCAGTT TTCCGCACGA CGAATACGAC
CAGGAAACGG AAATGGAACA ATGGGAACCG GCTGGTTCGC CGGTCGGCAA AACCTTGCAA
TTACAGGCCG GCAGCCCGGT GGACATCACC GGACTCGCAC TTCCGGCAGG TTTTTACAAG
ATAGAAATCA CCACCACCAA TGCCGCCGGC GAGAAACTGA ACGACGTCAG GTTCACCGAG
TTGAAAGATT TTGAAGCAAA AAAACCTGCC TACCCGCAAT ACCTCGCCAC AACACCCGGT
AATGCCGCCG AACCAGGTGA AAAAGGAAAT TATGCGATAG GGACCTCCGC CGAAAAGGCT
TTCGTGATCA GCAGCACAAA CCGGAAATCG GCGCCCGGCG GATTCTCCTA TCTGACACTG
AACGACGAGC AGCGGAAATT CGAATATACC CCTACCGAAG CGGATCGCGG CGGCTTTGCG
GTCGATTATG TATTTGTAAA ACATAACCGC ATCCACAGGC ACACCGAACA CATTGCCGTG
CCGTGGACGA ACAAAGACCT GACAATCGCA TACGAGACAT TCAGGGACAA AACGCTGCCG
GGAAGCAAGG AAACGTGGAA AATAAAAATC AGCGGCTACC GGAAAGAGGC CGTGGCTGCG
GAAATGCTCG GAAGCATGTA CGACGCCTCG CTTGACCAGT TTTACCCGCA TCAATGGGTG
AAACCAAACG TTTGGTCGGT CCTCACCGGC ATGCGGCACT GGTCCGATGC CGGCAATTTC
GCCTCCGTCA GTGCCTTCGC GCAATACGGA AATTTCAGCG AGTTCAAATC TTTCGACAAA
AGATATGACG AGCTGATCGG CTATATCAAC AAACGTCTCC GCCGGACCAG GACGCAATTG
AGGGGCGCCG TGGGCGGAAG AGCCGCTCCT TTGAGTAAGG CCACGACAGT GCAACCCGCC
CCGGAAAGTG ACGTCAACGA GGACAGGGGT TTCATGAGCG TAAGCGAACC GGAGATGAAC
AAGCGCCGTG ACGTCAGATA CAAAGCAGCC AGTGATCCGA ATGCCCCGGA TGTCGACCAG
CCTACCCCGG CTATCCGCAA GAATTTCAAC GAAACCGCCT TCTTCTTCCC CGATTTGAAG
ACCGACAGCG AAGGCAACAT TACCTTTTCT TTTACCATGC CGGAAGCGCT CACCCGATGG
AAATTCCAGG CGCTCGCGCA TACGCCGGAA CTCGCTTTGG GTTACACCAG CAAGGAAATC
GTTACGCAGA AAGACCTTAT GGTGCAGCCC AATGCGCCGC GGTTTCTGCG CGAGGGCGAC
CGGATCAGCT TTCCCGTGAA GGTGGTCAAT CTGGGAAGCA CTTCGTTGAG CGGCGAAGTA
TCGCTCTCCC TTTCCGACCC CGAAACCAAT GCCTCGCTGG ACAAGCTCTT TAAAATCGAA
AAGCCGTCGA GTCAGTTTTC CATCGCGGCA GGGCAGAGCA GCACGGCATT TTTTACTTTG
GAAATACCAA AAGGTTTCAA CAAAATGGTC ACCTGGCGGG CAATCGCAAA GGCTGGAAAT
CTGTCGGATG GCGAGGAAAA CCTGTTGCCG GTGCTGCCCA ATCGCATGCT GGTGACCGAG
AGTATGCCCA TTTCGATGAA AGGCAATGGT ACAAAGCATT TTACATTTGA AAAACTCCGC
AATTCGTCTA AATCGGCGAC CCTAACACAT CAGTCGGTTA CCGTAGAATA CAGCAGCAAC
CCGGCCTGGT ACGCAGTGCA GGCATTGCCT TACCTGATGG AATATCCCTA CGAATGCGCG
GAGCAGACCT GGAACCGGTA TTATGCCAAT TCGCTCGCCT CGCAGGTGAT CAATGCGTCA
CCGCGGATCG CAGAGGTTTT CAAGTCATGG AAAGGGACCG ATGCCTTGCA GAGCAGTCTT
TCTAAAAATG AGGAATTGAA GTCGCTGCTC GTGCAGGAAA CGCCCTGGGT TTTGGCTGCT
AAAACCGAAG AAGCGCAAAA ACGGAACATC GCATTGCTAT TTGACCTCGC CAAAATGGAG
AACGAGCTAA ATGCGAACAT GCGTAAATTG CAGGAAATGC AAAGCCCCAA CGGAGGCTTT
TGCTGGTTCA AAGGCGGCCC CGACGACCGC TACATCACAC AGTACATTGT GATTGGAATC
AGGCATTTAC AAAAAATAAA TGGCATCGCA CCATTGCAGC AACCGGCCAT CAACGCCATC
CTCGACAAAG CGATCCCCTA CCTCGACAAG CGCATCGAAG AAGATTACAA CCGGCTTGTC
AAGTCGAAAA CGAACCTGGA CAAATATGTC CCCGGCGCTT CGGAAATACA ATATCTGTAC
GCCCGCAGCT TCTTTGTCGT GCCCATTCCG GCCGCCACGC AGAAAGCCTA CACCTACTAC
CGCGAACGCG CCAGGCTCAC GTGGACTTCG CAATCGAAGT TCCTGCAAGG CATGACGGCC
CTGATGTGCC ACCGCACGAA AGACAGCAAA ACAGCCGGAC AGATCCTCGA ATCGCTACGG
CAAACTGCCG TTCGCAACGA AGAGCTCGGC ATGTACTGGA AAACCAGCCA ACGCAGCTGG
TGGTGGCAAG AGGCGCCCAT CGAACGCCAG GCATTGCTGA TCGAGGCATT CCAGGAGATC
GCCAACGACC AGGCCACCGT GGCGGATTTG AAAACCTGGC TCCTCAAAAA CAAGCAAACC
AATAGTTGGG AAAGCACCAA AGCCACCGCG GAGGCCTGCT ATGCGCTCCT CATGAACGGA
AGCGACTGGC TCGCCGAGTC CCCGCAAACT GCCGTTCGCC TCGGCGGCAC GGAAGTTAGT
TCCAAAGAAC AAAAAGCTGA AAATGGCACC GGGTATTTCA AAAAAACCAT TGACTCAGGA
ATCACTGCAC AAATGGGTAA TGTGGACGTT GTGGTGAATG GACAATCGGG CACTTCCCAG
CTCCCGTCGT GGGGCGCCAT TTACTGGCAA TATTTCGAAG ATCTAGACAA AATCACCTTC
GCCGATACGC CGCTCAAACT CAGCAAACAG CTTTTCGTAG AAACCAACAC TGACTCCGGC
CCCGTGCTCA CACCGGTGCG TGAGGGCGGA ACGGTGAAAG TAGGTGATAA AATCAAAGTC
CGCATCGAGC TGCGTGTGGA CCGTGATATG GAATATGTGC ATATGAAAGA CATGCGCGCT
TCCGGCCTCG AACCGGTGAA TGTCCTGAGC GGCTACCGCT GGCAGGGCGG CCTGGGATAC
TACGAAAGCA CCCGCGACGC GAGCACCAAT TTTTTCTTCA ATGCATTGCG CAAAGGAACT
TACGTGTTCG AATACCCGCT TTTTATCACT CACGAAGGCG ATTTCAGCAA TGGCATCACC
ACCATCCAAT GCATGTACGC ACCGGAATTT ACCGCCCACA GCGAGGGCGT CCGATTGAAA
GCATTACCTG CGAAGTAA
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| Protein sequence | MKLAYTFGYY LIITIIISLT MHTYGQGSLK NYDSEWKKVE ALAGKGLAKD ALAQVKEIYA
QAKKDKQDAQ LIKAALYMTE LQAENRENNA TAAIQELEKE MAGATGPARS ILASLVASEY
YNYYQTIRWQ LYNRTATVAF EKADVATWGT EDFHQRIGAL FLQSIENEAA LKPTRLDPYD
AIITKGNMRK LRPTLFDLLA FRALEYFSSD EREIKRPAYA FEINTASAFD PAADFVHRKF
ETKDSASLEH HALLLYQKLI AFHLEDKDPA ALIDADLARL QYVRQKSVHP DQSELYFMAV
SHVADQYQST PAAAQAWYLK AAWLNEKADA YQPGKDSTAR FERVKAAEIC QRIMRENPET
EGGANAFNLH KLINHKSLVF SIEAVNSDSR PFRVFVRYRN FDKLHLRVLK ATEVLRKALE
NNEESEKWST LAKLQSVKSW EQPLPDTRDF QQHSVEIKAD GLPAGEYLLL ASSDPAFHNT
NAALGAAVFY VSDISYIQKE SDLFVLNREN GAPLAGAKVQ LWERRYDYNT RTNVKSKTAL
LTTDANGHCT VPALQRDNYG TQRLLEVTHE NDRLFVQENV NQYYYYNEQP ETEHDNVAED
IYLFTDRSLY RPGQTVYYKG IVRKGESVLR NQQEEFTAAL YNANGEHVAE ARHRVNAYGS
FSGSFAVPGS GLTGSFHIRV RDNSRVNFQV EEYKRPRFAV EFDTLKAAYK VNEQIQVTGK
ASAYAGNAID GATVKYRVVR KPRLLYTGLL KRWWAPEELM EIAHGEAATD ASGRFQVSFE
AIPDRRVNVK LDPLFDYTVY ADVTDSNGET RSAQTNVTVS YKSYVLKTEI PSVIDVQNAR
SLSIRTENLA GAFVPAEASI QFTRIEPEKR LIRKRYWGHP DLFVLSKTAF VASFPHDEYD
QETEMEQWEP AGSPVGKTLQ LQAGSPVDIT GLALPAGFYK IEITTTNAAG EKLNDVRFTE
LKDFEAKKPA YPQYLATTPG NAAEPGEKGN YAIGTSAEKA FVISSTNRKS APGGFSYLTL
NDEQRKFEYT PTEADRGGFA VDYVFVKHNR IHRHTEHIAV PWTNKDLTIA YETFRDKTLP
GSKETWKIKI SGYRKEAVAA EMLGSMYDAS LDQFYPHQWV KPNVWSVLTG MRHWSDAGNF
ASVSAFAQYG NFSEFKSFDK RYDELIGYIN KRLRRTRTQL RGAVGGRAAP LSKATTVQPA
PESDVNEDRG FMSVSEPEMN KRRDVRYKAA SDPNAPDVDQ PTPAIRKNFN ETAFFFPDLK
TDSEGNITFS FTMPEALTRW KFQALAHTPE LALGYTSKEI VTQKDLMVQP NAPRFLREGD
RISFPVKVVN LGSTSLSGEV SLSLSDPETN ASLDKLFKIE KPSSQFSIAA GQSSTAFFTL
EIPKGFNKMV TWRAIAKAGN LSDGEENLLP VLPNRMLVTE SMPISMKGNG TKHFTFEKLR
NSSKSATLTH QSVTVEYSSN PAWYAVQALP YLMEYPYECA EQTWNRYYAN SLASQVINAS
PRIAEVFKSW KGTDALQSSL SKNEELKSLL VQETPWVLAA KTEEAQKRNI ALLFDLAKME
NELNANMRKL QEMQSPNGGF CWFKGGPDDR YITQYIVIGI RHLQKINGIA PLQQPAINAI
LDKAIPYLDK RIEEDYNRLV KSKTNLDKYV PGASEIQYLY ARSFFVVPIP AATQKAYTYY
RERARLTWTS QSKFLQGMTA LMCHRTKDSK TAGQILESLR QTAVRNEELG MYWKTSQRSW
WWQEAPIERQ ALLIEAFQEI ANDQATVADL KTWLLKNKQT NSWESTKATA EACYALLMNG
SDWLAESPQT AVRLGGTEVS SKEQKAENGT GYFKKTIDSG ITAQMGNVDV VVNGQSGTSQ
LPSWGAIYWQ YFEDLDKITF ADTPLKLSKQ LFVETNTDSG PVLTPVREGG TVKVGDKIKV
RIELRVDRDM EYVHMKDMRA SGLEPVNVLS GYRWQGGLGY YESTRDASTN FFFNALRKGT
YVFEYPLFIT HEGDFSNGIT TIQCMYAPEF TAHSEGVRLK ALPAK
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