Gene Dfer_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3204 
Symbol 
ID8226779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3924964 
End bp3926046 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content49% 
IMG OID644931034 
ProductLinoleoyl-CoA desaturase 
Protein accessionYP_003087582 
Protein GI255036961 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATATC AAAAAGTCAA ATTCACAAAT CCGGAGAAAA GTACTTTTTT TCCTACCCTA 
AGACACCGGG TCGATCAGTA CTTCTCCGCC AACGATATCT GCAAGTCGGG TGGGAAAAGT
ATTATTTACA AGGCCATATT CATGCTGAGC CTGTACCTGG TGCCATACAT CCTGATCCTT
TCCGATCAGT TCGGCATACT CGCTATGGCA GGTTTTGCGG TTGTGATGGG GCTTGGCGTG
GCGGGCGTAG GGATGTCGGT CATGCACGAC GCGATTCACG GCTCGCTGGC GACTTCAAAT
TTGCTCAACC GGATTTTCGG CGCGTCGATC TACCTGCTTG GCGGCAATGC CTATAATTGG
GAAGTTCAAC ATAACAGGCT GCACCACACC TACACCAACA TTCACGACGT AGACGAAGAC
ATTACGGGCA AATTCCTCCT GCGGCTCTCA TTTCAGGAAA AACAAAGGTA TATCCATCGT
TTTCAGCACA TTTACGCATT TTTTCTGTAC AGCCTGATGA CGCTGTCGTT CCTCTGGAAG
GATTTTAAGG AAATATCCCT TTTCAATAAA ATGTCTGGTT CAGGAATGAC CAAGCCCTTT
CCCCGAAAGG AACTGGTGAA ACTGATATCC ACCAAGCTGG CTTACGTGAT ATTTATATGC
ATCATCCCGC TCTGGCTGAC GTCCATAACC TTCTCGGAAT GGCTGATCGG CTTTTTGATC
ATGCACGCCA CGGCTGGGAT GATCCTCAGC ACGGTATTTC AAATGGCGCA TGTGGTAGAA
GGTGCACAAC AGCCGGAACC TGACAATTCG GGCTGCATTG AAAATGCGTG GGCCGTTCAC
CAGCTGCAAA CCACCTCCAA TTTCGCAGGA AAAAACCGCC TGCTCTCCTG GTTCATCGGC
GGCCTCGACT ACCAGATCGA ACACCACCTC TTCCCCTCCA TTTCCCACGT CCATTACCAC
GCATTATCGC CTATCGTAAA AGCCACCGCA TTGGAATTCG GGCTCGTTTA CAACGCAAAA
ACCAACTTCC GCAACGCACT TGGTTCGCAT GTGAGGATGT TGAAAATCAT GGGAATGAGG
TAG
 
Protein sequence
MQYQKVKFTN PEKSTFFPTL RHRVDQYFSA NDICKSGGKS IIYKAIFMLS LYLVPYILIL 
SDQFGILAMA GFAVVMGLGV AGVGMSVMHD AIHGSLATSN LLNRIFGASI YLLGGNAYNW
EVQHNRLHHT YTNIHDVDED ITGKFLLRLS FQEKQRYIHR FQHIYAFFLY SLMTLSFLWK
DFKEISLFNK MSGSGMTKPF PRKELVKLIS TKLAYVIFIC IIPLWLTSIT FSEWLIGFLI
MHATAGMILS TVFQMAHVVE GAQQPEPDNS GCIENAWAVH QLQTTSNFAG KNRLLSWFIG
GLDYQIEHHL FPSISHVHYH ALSPIVKATA LEFGLVYNAK TNFRNALGSH VRMLKIMGMR