Gene Dfer_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3175 
Symbol 
ID8226750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3884940 
End bp3885716 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID644931005 
Productprotein of unknown function DUF1080 
Protein accessionYP_003087553 
Protein GI255036932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCAA AAATGAGTTT CAGATTTATC AAGGCCGGAA TGCTCCTGGC CGCCGTGATG 
ACCCTCACAA GCCAGGTCGA CACATTTGCT CAAAAAGCTG AAAAAGGCTT CAAATCCATT
TTCGATGGAA AAACGCTCAA AGGCTGGGAC GGCGATCCGA AATACTGGCG CGTTGAAAAC
GGCAATCTGG TAGGCGAGAT CACTCCTGAG ACGCTTCTGA AAACGAACTC ATTCATCATC
TGGCGCGGCG GCGAGCCCGG CGATTTCGAG CTCAAAGGCT CTTTCAAAAT CGCAGCTGCG
GGAAACTCCG GCATTAATTA CCGCTCCGAG CAGCTCACCG ACGTGCCTTT TGCATTGAAA
GGCTACCAGG CGGATATCGA TGGTAAAAAC AACTACACCG GCCAGAATTA CGAAGAACGC
AAGCGCACCA CACTGGCCTA CCGCGGCCAG AAAACGGTGA TCAAGGAATA CACCGGCGAC
AAAACACCCG AAGGCGTCCG CAAAAACGTG TCGAAAAACG CCTGGACCGG CTTCGAAGTG
GTAGGTTCGC TCGGATCTTC CGACTCTTTG AAGACATTGA TCAAGAGTGA AGACTGGAAC
ACTTTCCACC TGGTAGTGAA GGGAAACCGC CTGCAACACT ACATTAATGA CGTCCTGATG
AGCGATGTTA CCGACAATGA CACGGTAAAT GGCGCCAAAA AAGGCCTTTT AGGAGTACAG
GTGCACGTAG GGCCGCCTAT GAAAGTGGAA TACAAAGACC TGCGCATCAA ACAATAA
 
Protein sequence
MRSKMSFRFI KAGMLLAAVM TLTSQVDTFA QKAEKGFKSI FDGKTLKGWD GDPKYWRVEN 
GNLVGEITPE TLLKTNSFII WRGGEPGDFE LKGSFKIAAA GNSGINYRSE QLTDVPFALK
GYQADIDGKN NYTGQNYEER KRTTLAYRGQ KTVIKEYTGD KTPEGVRKNV SKNAWTGFEV
VGSLGSSDSL KTLIKSEDWN TFHLVVKGNR LQHYINDVLM SDVTDNDTVN GAKKGLLGVQ
VHVGPPMKVE YKDLRIKQ