| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3174 |
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| Symbol | |
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| ID | 8226749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3883990 |
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| End bp | 3884841 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931004 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003087552 |
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| Protein GI | 255036931 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA TCGGATTTAA TGTGCTGGCC TGGACGGCGG CAGTTTCGGA TGACCTGTTT
CCGATCATCG AAAGACTGAA AACGATTGGT TACGACGGTG CCGAGTTTTA TTTAGGACCC
CAGGAAGCAG CGGCTTACCA GCGAATGGGC AGTTTTGTAA AAGACCTGGG TCTTGAAACC
ACCGCGGTAA TGACGCTCGG AGCCGATGAA AACCCGGTAA GCGACTCGAT TGAAGTTCGG
CAGAAAGCGC TGGACAAGAT CAAATGGGCG GTGGACCGCG CGCATGATCT CAATTCAAAA
GTGATTTGCG GGCCGTTCCA TTCGGCGCAC ACGGTGTTTG TGAACCGCCC CGCCGAAGAC
CGGGAATATG CATTGGCCGG CGAAGTGCTG AATGCCGCCG CTGAGTATGC CGCACAAGCT
AACATCACCT TTGCATTGGA AGCGCTCAAC CGGTTTGAAT GCTATTTGTG CAATACCATG
GAGCAGCTGC TCAAACTCGT GAAAGCCGCC GACCATCCCA ACGTGCGGGC GATGTTTGAC
ACGCACCATT CCAATATCGA GGAAAAAAGC TATCTGAACG GATTGCAGAC GATCCAGCCA
GTCCTCGCGC ACGTGCACAT CAGCGAAAAT GACCGCGGTA CGCCGGGCAC AGGCCAGGTG
AAATGGGACG ACGCATTTGC TGCCTTGGCA GCGATCAAAT ATGACGGCTG GCTGACGATC
GAGGCATTTT CACGCAACGA TCCGGGCTTT GCGAATGCGA TCGGCGTTTG GCGGGAGTTT
AACGAGCCGT GGGACATTGC GGAAAACGGC TACAAATTCA TCCGCGAAAT GAGCCTGAAA
CACGGGCTCT GA
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| Protein sequence | MNKIGFNVLA WTAAVSDDLF PIIERLKTIG YDGAEFYLGP QEAAAYQRMG SFVKDLGLET
TAVMTLGADE NPVSDSIEVR QKALDKIKWA VDRAHDLNSK VICGPFHSAH TVFVNRPAED
REYALAGEVL NAAAEYAAQA NITFALEALN RFECYLCNTM EQLLKLVKAA DHPNVRAMFD
THHSNIEEKS YLNGLQTIQP VLAHVHISEN DRGTPGTGQV KWDDAFAALA AIKYDGWLTI
EAFSRNDPGF ANAIGVWREF NEPWDIAENG YKFIREMSLK HGL
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