Gene Dfer_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3157 
Symbol 
ID8226732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3861341 
End bp3862564 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content52% 
IMG OID644930987 
Producthistidine kinase 
Protein accessionYP_003087535 
Protein GI255036914 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGC TGCTGATTTA CGCGGCCGTG GGTTTCGCTT TTTACTGGAT CATCAATTTC 
ATGATCTACG ACGAGGTGGA AAGCCGGCTG ATGGTCGAAA AGCAGGATTT TGAAGCCTAT
GTCCGAAGCA ACGACACCTG GTCCAACAAT TCCTATTTTG TCGAAAACAA AATTGAAGTG
GTGCCGGTGT ACGGGAAATT CAAAAACGAG GTCGCATTCA CCGACACGCT GATCAGCAAC
CGCTACGACG AAACCGCCGA CCCGTTCCGG CAGCTCACTT TCTACACATT AATCGGCGGA
TCGCCCTACC GCGTGGCCAT CCGGAAGTCG ATGATCGAGT CTTACAAGCT CATTGAAGCC
ATTTCGGTGG CGATGATCGC CTTCTTAGGC CTGCTGCTGG TGAGCACATT CCTGTTTCAC
CGGGTGCTGT CCGGCAAGCT CTGGAAGCCT TTTTACGATT CGCTGGCGCG GATCAAGGAT
TTTGACTGGA CCAAAAACGA GCCGCTCGAA ACCGTCCGCA GCGAGATTAC CGAGTTTAAC
GAGCTGGGGG ATGTGATGGA GAAAATGGCT TCCAAAATGC AGCACGATTA CCGGAGCCTT
CGCGAATTTA CGGAAAATGC GTCCCACGAA ATCCAGACGC CGCTGGCGCT TATCAATGCA
CGTGTGGAGC AATTCATTCA ATCCGGCGAT CTCGGCGAAA ACCATACTTA CTGGATCGAG
GAAATTTACC ATGCCGCGCG GCGGATGTCG AGGCTCAACC AGGGATTGTT ATTGTTGGCA
AAAATTGAGA ACCAGCAGTT TACCGAGCAG GAGGAGCTCG ATCTTTCGGA GCTCGCATTG
AACAAACTCA AAGATTTCGA GGACATTTTG CAGCATAAGG AAATTCGTGT CGTGGTGCGA
TCCACCGGCA GTTTCCGGAA ACTGATGTCG CCTGCATTGG CCGACATTCT GCTTACGAAC
CTGATTAACA ATGCGATCCG GCACAATTAT CCGGGCGGGG AGCTCAGGCT GGAATCAGGT
GCTGATTATG TGCAGGTGAG CAACACCGGT CATGCATTGA AAAGTGATCC CGAGCGATTG
TTCGAGCGGT TCAAGAAGGA ATCCACCGGC GCCGAGTCGC TGGGGCTCGG ACTGGCGATT
GTGAAGCAGA TCTGCGAAAA TTGCGATTTG CGCATTTCCT ATCAATACCA CGAGCCGATT
CACGCCATTC GTATTACAGA ATAG
 
Protein sequence
MASLLIYAAV GFAFYWIINF MIYDEVESRL MVEKQDFEAY VRSNDTWSNN SYFVENKIEV 
VPVYGKFKNE VAFTDTLISN RYDETADPFR QLTFYTLIGG SPYRVAIRKS MIESYKLIEA
ISVAMIAFLG LLLVSTFLFH RVLSGKLWKP FYDSLARIKD FDWTKNEPLE TVRSEITEFN
ELGDVMEKMA SKMQHDYRSL REFTENASHE IQTPLALINA RVEQFIQSGD LGENHTYWIE
EIYHAARRMS RLNQGLLLLA KIENQQFTEQ EELDLSELAL NKLKDFEDIL QHKEIRVVVR
STGSFRKLMS PALADILLTN LINNAIRHNY PGGELRLESG ADYVQVSNTG HALKSDPERL
FERFKKESTG AESLGLGLAI VKQICENCDL RISYQYHEPI HAIRITE