Gene Dfer_3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3143 
Symbol 
ID8226718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3834231 
End bp3835058 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content58% 
IMG OID644930973 
ProductABC transporter related 
Protein accessionYP_003087521 
Protein GI255036900 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTGG ATTTCGCATT GCCGGCCAAC AGCATTCTGG CGCTCACAGG GCCATCGGGC 
GCAGGAAAAA CCACGTTATT GAAACAAATA GCGGGCCTCT CGATGCCTTC CTCCGGTCGG
ATCATTTTTG GAAAAAACCA ATGGCTCGAT ACGGCGAACC GCATGCACAT TCCCGCCCAG
CACAGGCACA TTGGTTTTGT ATTTCAAGAC TACGCATTGT TCCCGAACAT GACCGTGATG
CAAAATCTGG AATACGCCCT GCCCCGCAAC GGCGACGGGA CATTGATCGG TCATTTGCTG
GAAACCACCG GCCTGGCCCA GCTCGCAGGC CGCAAACCGC ATCAGCTCTC GGGCGGGCAG
CAGCAGCGCG TCGCCCTCGC CCGCGCCCTC GTACGCGAGC CGGAATTGCT GCTGATGGAC
GAGCCTTTCG CCGCCCTCGA CCCGGAAATG CGCGTGCAAT TGCAGGATTT ATTATTGAAA
CTGAGGCGTG AACGGCCATT TACGGTCGTC CTGGTTACGC ACGATATGGG TGAAATTTTC
CGCCTCGCCG ACCTTGTGGC TGTCATGGAT ACCGGCAAAC TCACGCGCAT CGGAACGCCC
GCCGAAATGT ATCTCGGAGA GGCCGTCCCG CCACAAGCGC TGCTGATTTA CGGCGAGGTG
CTGGCCTGCG AACGGCAGAG CGAATCGCTT TCGGTACAAG CGTGGATCGA CGGGCGGGTC
CGTCAGTTCA GCATTCCGTT GCATTGGGAA GCACAATTAT CACCCGGCAC GCGGTTCACA
ATGGAATATT CGGCCGGTCA GCCAGGGATC CGCATTCTGA AAACCTGA
 
Protein sequence
MEVDFALPAN SILALTGPSG AGKTTLLKQI AGLSMPSSGR IIFGKNQWLD TANRMHIPAQ 
HRHIGFVFQD YALFPNMTVM QNLEYALPRN GDGTLIGHLL ETTGLAQLAG RKPHQLSGGQ
QQRVALARAL VREPELLLMD EPFAALDPEM RVQLQDLLLK LRRERPFTVV LVTHDMGEIF
RLADLVAVMD TGKLTRIGTP AEMYLGEAVP PQALLIYGEV LACERQSESL SVQAWIDGRV
RQFSIPLHWE AQLSPGTRFT MEYSAGQPGI RILKT