Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3143 |
Symbol | |
ID | 8226718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3834231 |
End bp | 3835058 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644930973 |
Product | ABC transporter related |
Protein accession | YP_003087521 |
Protein GI | 255036900 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGTGG ATTTCGCATT GCCGGCCAAC AGCATTCTGG CGCTCACAGG GCCATCGGGC GCAGGAAAAA CCACGTTATT GAAACAAATA GCGGGCCTCT CGATGCCTTC CTCCGGTCGG ATCATTTTTG GAAAAAACCA ATGGCTCGAT ACGGCGAACC GCATGCACAT TCCCGCCCAG CACAGGCACA TTGGTTTTGT ATTTCAAGAC TACGCATTGT TCCCGAACAT GACCGTGATG CAAAATCTGG AATACGCCCT GCCCCGCAAC GGCGACGGGA CATTGATCGG TCATTTGCTG GAAACCACCG GCCTGGCCCA GCTCGCAGGC CGCAAACCGC ATCAGCTCTC GGGCGGGCAG CAGCAGCGCG TCGCCCTCGC CCGCGCCCTC GTACGCGAGC CGGAATTGCT GCTGATGGAC GAGCCTTTCG CCGCCCTCGA CCCGGAAATG CGCGTGCAAT TGCAGGATTT ATTATTGAAA CTGAGGCGTG AACGGCCATT TACGGTCGTC CTGGTTACGC ACGATATGGG TGAAATTTTC CGCCTCGCCG ACCTTGTGGC TGTCATGGAT ACCGGCAAAC TCACGCGCAT CGGAACGCCC GCCGAAATGT ATCTCGGAGA GGCCGTCCCG CCACAAGCGC TGCTGATTTA CGGCGAGGTG CTGGCCTGCG AACGGCAGAG CGAATCGCTT TCGGTACAAG CGTGGATCGA CGGGCGGGTC CGTCAGTTCA GCATTCCGTT GCATTGGGAA GCACAATTAT CACCCGGCAC GCGGTTCACA ATGGAATATT CGGCCGGTCA GCCAGGGATC CGCATTCTGA AAACCTGA
|
Protein sequence | MEVDFALPAN SILALTGPSG AGKTTLLKQI AGLSMPSSGR IIFGKNQWLD TANRMHIPAQ HRHIGFVFQD YALFPNMTVM QNLEYALPRN GDGTLIGHLL ETTGLAQLAG RKPHQLSGGQ QQRVALARAL VREPELLLMD EPFAALDPEM RVQLQDLLLK LRRERPFTVV LVTHDMGEIF RLADLVAVMD TGKLTRIGTP AEMYLGEAVP PQALLIYGEV LACERQSESL SVQAWIDGRV RQFSIPLHWE AQLSPGTRFT MEYSAGQPGI RILKT
|
| |