Gene Dfer_3137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3137 
Symbol 
ID8226712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3828309 
End bp3829505 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content55% 
IMG OID644930967 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_003087515 
Protein GI255036894 
COG category[S] Function unknown 
COG ID[COG2989] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATGC TGTCCGGCCT GGGCAAAGCC CGATATGTAC CCCTCCTGAT CCTTTTTACG 
CTTGCCATCA TGCAATCCTG CCGGAAAAAC CCGAAGGAAA TGACTAACGC GGAACTCGCG
GAGGCCATCG GCAGCAAGGA TACTTACCAG GAGCTCCTCA CCGCCGCCGC GAAAGCAGGC
GTAGACACGA GGAAATTTGA AGCCGGCAGC GGCACCGCAC CCGTTTTCGC ATTACTGGAA
GAGGTTGCAT TCGGCCACAA GCCAACCATC CGCTTCACCC AGAAAAAAGT AAAGGCCGAC
ACGCTGCTGA TCCGCAATGC GGCCGAAGAT TTGGTAAAAG GCCAGTCGGT GGAAAAAGTG
CTGGAAAAGC TGGAACCGGT ATTTCCGGTT TACAACAACC TCAAAATCCA TTACGACCGG
CTTTTGAAAG CCCAAAAGAA GGATAGCGCC GCCTATGTGG CCCAAACCCT GAATGCATAC
CGCTGGATTC ACCGGCAGAT CCAGGGCTCA CCGCGCTTTG TGCTTGTGAA TATCCGCGGC
GCATACCTCA CCGCCATGGA CTCGGCCGGA CAGAATGTAC TCACCATGCG CACCGTCGTA
GGCAAGCGCG ATACGCCTAC GCCCACCATC GACACCTACG CGACGAGCAT TGTAACGCAC
CCGTACTGGA ACGTTCCCAA GAGCATCGCC ATCAAGGAAA TATTTCCCAA AGCCGCCGCC
GACCCCGAAT ACCTGAGCAG AAACCGCATT CAGGTAATTG GTAAAGATGG GCAGGCAATT
GATCCGCAGG AGCTGGATTG GGGCGACCTT ACAGCCGAAA AATTCCCCTA CCGCTTCCGG
CAGGAGACCG GCGAGGACAA TTCGCTGGGA TTGCTGAAAG TGGAGATAAA AAACCCGCTG
GCGATTTACC TGCACGATAC GAATGCACGG TATTTGTTCA AAAGCGGCCA GCGCTGGCGC
AGCCACGGGT GCGTGCGCGT GCAGTATCCG ACCGACCTAG CCAATTACAT GGCAGGTTCC
AAATTGCTCG ACAGTGATTT CATGACCGAG CCGGATTCCG TGTCGCACCC GCCGAAATGG
CATAAGCTGC AAGTACGGAT TCCCGTTTTT CTGCTCTATT TACCGGCAGA CTGCAATCCG
AAAGGCGACC TGATGTACTT CCCGGACGTC TACAAGCGCG AAACCCCCAA TGCCTGA
 
Protein sequence
MQMLSGLGKA RYVPLLILFT LAIMQSCRKN PKEMTNAELA EAIGSKDTYQ ELLTAAAKAG 
VDTRKFEAGS GTAPVFALLE EVAFGHKPTI RFTQKKVKAD TLLIRNAAED LVKGQSVEKV
LEKLEPVFPV YNNLKIHYDR LLKAQKKDSA AYVAQTLNAY RWIHRQIQGS PRFVLVNIRG
AYLTAMDSAG QNVLTMRTVV GKRDTPTPTI DTYATSIVTH PYWNVPKSIA IKEIFPKAAA
DPEYLSRNRI QVIGKDGQAI DPQELDWGDL TAEKFPYRFR QETGEDNSLG LLKVEIKNPL
AIYLHDTNAR YLFKSGQRWR SHGCVRVQYP TDLANYMAGS KLLDSDFMTE PDSVSHPPKW
HKLQVRIPVF LLYLPADCNP KGDLMYFPDV YKRETPNA