| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3104 |
|---|
| Symbol | |
|---|
| ID | 8226678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3792850 |
|---|
| End bp | 3794277 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644930935 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_003087484 |
|---|
| Protein GI | 255036863 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000481506 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACTT TCCATAGCCT GATGAGAGAT TATACCCGCA CTTGCCTGAT GTTACTACTG
ATTTTGACAG GCTTTTTTTC CACCGCTTAC TCCCAGGGCT ACCGTATCGA CGCCACCATC
CACGGCATGC GGGACTCGTC TTTCGTGCTC GCGCATTACA ATCGCAACGG CTCGCAGATC
GTGCCGAAGG ACACGGCCAA GGCCGACGCC AACGGAAAAA TCGTGTTTGA GGGCAAAACG
GCGCTCCCGG GCGGACTCTA CGTAATACTA TTTCCGGGAA ACCAGAAGAT GATCGAGGTG
ATTTATTCCG GTAAGGAAAC GAATTTTGCC ATTGAGGCCG ATACGAGCGA TTTGAACGGC
TCCGTGAAAG TAACCGGCTC TCGGGAAAAC GAACTTTTCT ACAACTATCG CCAGGAACTT
GCAAAAGGCG GTAAGGAAAT AGAGGTTTTG GGTAAACAGG CAACTCCCGA AGCCCAGGCC
CGCGTGAAAA CGATCCAGGA GGGCTTCGGC GCTTACCGCA AAAAATTGCT CGCCGAAAAT
GCCGGCACCT TCACGGCGCA GCTCCTGAAA ATGTCGGCCG ACCCGGAAAT CCCCGCAGCG
CCCAAACTGG CAAATGGTAA AACTGATTCC ACCTGGATTT TTAATTACTA CAAAGCGCAT
TACTGGGATG CATTCGATTT TTCGGACCCG CGCATTATGA ACACGCCGTT CCTCGAACCC
AAAATGGAGC GGTATTTCAA AAACCTGGTA GTGCAGGTAC CCGATTCGAT TATTAAAGAC
GCCGATCTCA TTGTGAAGAA GGCCTCCGCG AACAAAGACA TCAAATCATG GACGGTTTAT
TACATTACCA ATCAATACGA AAATCCTAAA ACGGTCGGGA CGGAAGCTGT GTGGGTGCAT
ATGGCCACTA AATATTACCT GTCAGGTGAA ATGGGCGTTT CGGAAGAAGT CAAAAAGCGG
GTGAGTGAAA AGGTGGCGAC CATGAAGGAC CTGCTCGTGA ACAAAACCTT CCCGGCGCTG
ACATTGACCG ACCCCGCCGG CAAAAAAGTG GGTGTACAGG CCATCGACGC GAACTATACC
GTGCTGTTTT TCTATGCCCC CACCTGCGGG CATTGCAAGG AAGCCTCGCA TGTGCTCAAA
GCATTTTACG ATAAGAACAA GGCCAAAGGT ATTAAGGTAA TGGCCATTTC GACCGAGCAT
AATGTGGAAG AATGGAAAAC ATTCATTAAA ACCTACCACA TGGAAGAGCT GATCAACGGC
TTTGATGCAT TGAACCAGAT CGACTTCAAC CGGAAATACG ATGTGGTAAC CACGCCGATG
ATCTACATTT TAGATAAAAA CAAAAAGATT ATCGCCCGCA AAATGCCGGT AGAGCAGCTG
GAAGACTTTT TGAACTACTA CCAAAACAAA ATGGCCAGAA AACTCTGA
|
|---|
| Protein sequence | MQTFHSLMRD YTRTCLMLLL ILTGFFSTAY SQGYRIDATI HGMRDSSFVL AHYNRNGSQI
VPKDTAKADA NGKIVFEGKT ALPGGLYVIL FPGNQKMIEV IYSGKETNFA IEADTSDLNG
SVKVTGSREN ELFYNYRQEL AKGGKEIEVL GKQATPEAQA RVKTIQEGFG AYRKKLLAEN
AGTFTAQLLK MSADPEIPAA PKLANGKTDS TWIFNYYKAH YWDAFDFSDP RIMNTPFLEP
KMERYFKNLV VQVPDSIIKD ADLIVKKASA NKDIKSWTVY YITNQYENPK TVGTEAVWVH
MATKYYLSGE MGVSEEVKKR VSEKVATMKD LLVNKTFPAL TLTDPAGKKV GVQAIDANYT
VLFFYAPTCG HCKEASHVLK AFYDKNKAKG IKVMAISTEH NVEEWKTFIK TYHMEELING
FDALNQIDFN RKYDVVTTPM IYILDKNKKI IARKMPVEQL EDFLNYYQNK MARKL
|
|---|
| |