| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3055 |
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| Symbol | |
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| ID | 8226629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3735867 |
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| End bp | 3738473 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644930886 |
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| Product | membrane-bound dehydrogenase domain protein |
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| Protein accession | YP_003087435 |
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| Protein GI | 255036814 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02604] putative membrane-bound dehydrogenase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.225769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTGTTA ATCCCGACAG CGCTTATGCG GCGCTTTCGG AAACGGAAAG GCGCTTTTCG
CGTAATGCCG TGGCCGGGGT GCAGGCTGCC GACGGGCTCG AAGCGACGCT CTTCGCTTCC
GAACCGAATG TGATCAACCC CATCAATATC GACGTCGATC ACCGTGGCCG CGTGTGGGCC
TGCGAGGCGT TCAATTACCG GCCTGCCGTG AACGGCAAGT CGGAGCTGGG GCAGGGCGAC
CGGATCGTGA TCATGGAGGA CAAGGACGGC GACGGTAAGG CGGATGTCAC GAAGGTTTTT
TACCAGGGAC CGGAGCTCAA TGCGCCCTTG GGCATCTGGG TGATGGGCAA CAAGGCCATC
GTGTCGCAAA GTCCGTATGT GTGGCTTTTT ACAGACACTA ACGGCGACGA CAAGGCTGAT
AAAAAAGAAA TCCTTTTCAA AGGCATAGGA GGCGCGCAGA ATGACGCCGG CATTCACGCA
TTCGTGTTTG GACCGGATGG TAAGTTTTAC TTCAACTACG GTAACGCAGG CCGGCAACTC
GTGGACGGAC AGGACCGCCC GCTGCTCGAT AAGTACGAGC GGCCGATCGA TTTCAGGCAG
TTCAAGCAAG GCGTGGTTTT CCGCTGCGAG CAGGATTTTA CCAAAGTCGA GATCATGGCC
GAGAATTTCC GGAATGGCTG GGAAGTGGCT GTGGATAGCT ATGGCACCAT GTGGCAGTCG
GACCAGGAGG AGCCCGGCAA TGGCGGCGAC CGCGTATCGT ATGTGATGGA GAATGGGAAT
TTTGGGTATG TGGATGAAAT GACGGGTGCA AGCTGGCGTC TTAACCGCAC CAATCTCGAA
GACGAAATTC CCCGCCGCCA CTGGCATCAG AATGATCCGG GTGTCGTTCC TGATTTGCTG
GAAACCGGTT CGGGTTTTCC AATGGGTATG ACGATCTATG AAGGTGACCT GCTGCCGCGG
CGCTATTGGG ACCAGATATT GCTGGCGGAT GCAGGCCAGG GCTACGTAAG CGCATTTCCG
GTGCAAACTG ATGGCGCCGG CTACAAATCG ACCGGCATTC TGCCCATTCT GGAAGGTAAG
CGCGATAAAT GGTTCAGGCC GACGGACGTT TGCGTGGCAC CGGATGGGTC CCTCATCATC
TCCGATTGGT ACGATCCTGT GGTAGGGTCG CACAAAATGA AGGACCGGAG CCGCGGCCGC
ATTTTCCGAG TGGCGCCTAC GGGCACTCCG TACAAGATCC CGGTTTTCGA CCTGTCCATT
CCCGAGCAGG CTGTGAAAGC ATTGCAGAGC CCCAACCTGT CGCAGCGCTA CCTGGCCTGG
AATGCCTGTG TGAGCCACGG CTGGGCCGCA GAGCCTTTTT TAGAAGAACT GTTCAGGCAG
TATAATGGTA ACCCGAAGCT GCGTGCGAGG GCGTTGTGGG TGCTGAACCG TATCGAAGGT
TTCAATTACC GTAACCTGGA CATTGGCTTC CGCGAGCTGA ACCCCAACCT GCGCATTACC
GCATTGCGCG CCGTACGCCA GCGCAACAGC GACCCCACCG AGTATATCAA GCGCCTCACG
TCCGACCGCG ATCCGCAGGT TCGCCGCGAG TGTGCATTGG CCATTAACCA TAACCACACC
TACGAAGCAT TGGATGTGTG GCTGCAATTG GCAAAACAAT ACAAAGGAAA CGACCGCTGG
ACGGTGGAAG CGCTCAGCAT CGGCGCCTAC GACCAGTGGG AGCGGCTCTT CCCGGCATGG
CTCGAAAGGG CCGGTGCCAA ACCCTGGACT ACCGACGCCG GAAAGGACAT TATCTGGCTG
GCCCGCACGC GCAAAGCCAT TCCATACCTG AGTGAGCTGG CCGCCGATAC ATCGGTGAGT
TTCAAAAGCA GGCTCCGGTA TTTCCGCTCG TTCGACTTTT TTCATGCGGG TTATGAGAAA
ACCCAGGCAT TGCTGAGCGT GCTCAACGTG CCGTCTTCCG ACCGGATTGA AGTGAGTAAG
CTGGCATTGC TGCATTTGGA TAAATCATTT GTAACCAACT CCCAGCAAGG CCGCACGGCG
CTGAGTAAAT TGCTCGACGA AACCTACGGC ACCGAGCATT ATATCGACCT TATGACCCGC
TACGAGCTGG AATCGGAGAA CGATCGGCTG CTGAAACTGG CTTTGGACAA ATCCGACGAA
GTGATAGGCC GCGACGCGGG AGGGTTGCTG CTGGAGCAGG GCGGGATTAC CTACCTGACC
CAGAAACTTG CGGGAATGAA TGAGTCAAAA AAATCGGCAT TGCTGGCGTC CATCCAGACT
GTGGGCAGCT CAGAATCGAT TTACTTGCTG CGATCCACCG TTTTGAACAG CGACGAATCG
CCGAATGTCC GTAAGAACGC GGCGCGCTAC CTCGGCGCGA GCTGGCCCGG CGAAGAGGCG
GTGGTGAAGC TGCTCGTCAA CAACCAGGTC GACGGTGAGG TGAAGGAAGC GGCATTGGAA
GGCGTGAAGA ATGCATTCCG TGAGGAGATC AAGGCACAAC TGGCTCCCTA CCTGCCCAAG
CCGCCTGTGG AAGAAGTAGC AACCAAGCCT GCGGATGAAT CCAAAAGCAG CAAGAAAGAA
CGCCGCAAAC GCAGAAAAAA CCGGTAG
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| Protein sequence | MVVNPDSAYA ALSETERRFS RNAVAGVQAA DGLEATLFAS EPNVINPINI DVDHRGRVWA
CEAFNYRPAV NGKSELGQGD RIVIMEDKDG DGKADVTKVF YQGPELNAPL GIWVMGNKAI
VSQSPYVWLF TDTNGDDKAD KKEILFKGIG GAQNDAGIHA FVFGPDGKFY FNYGNAGRQL
VDGQDRPLLD KYERPIDFRQ FKQGVVFRCE QDFTKVEIMA ENFRNGWEVA VDSYGTMWQS
DQEEPGNGGD RVSYVMENGN FGYVDEMTGA SWRLNRTNLE DEIPRRHWHQ NDPGVVPDLL
ETGSGFPMGM TIYEGDLLPR RYWDQILLAD AGQGYVSAFP VQTDGAGYKS TGILPILEGK
RDKWFRPTDV CVAPDGSLII SDWYDPVVGS HKMKDRSRGR IFRVAPTGTP YKIPVFDLSI
PEQAVKALQS PNLSQRYLAW NACVSHGWAA EPFLEELFRQ YNGNPKLRAR ALWVLNRIEG
FNYRNLDIGF RELNPNLRIT ALRAVRQRNS DPTEYIKRLT SDRDPQVRRE CALAINHNHT
YEALDVWLQL AKQYKGNDRW TVEALSIGAY DQWERLFPAW LERAGAKPWT TDAGKDIIWL
ARTRKAIPYL SELAADTSVS FKSRLRYFRS FDFFHAGYEK TQALLSVLNV PSSDRIEVSK
LALLHLDKSF VTNSQQGRTA LSKLLDETYG TEHYIDLMTR YELESENDRL LKLALDKSDE
VIGRDAGGLL LEQGGITYLT QKLAGMNESK KSALLASIQT VGSSESIYLL RSTVLNSDES
PNVRKNAARY LGASWPGEEA VVKLLVNNQV DGEVKEAALE GVKNAFREEI KAQLAPYLPK
PPVEEVATKP ADESKSSKKE RRKRRKNR
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