| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3043 |
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| Symbol | |
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| ID | 8226617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3722201 |
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| End bp | 3723877 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930874 |
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| Product | Beta-mannanase-like protein |
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| Protein accession | YP_003087423 |
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| Protein GI | 255036802 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4124] Beta-mannanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0756266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAA AAGGTCTGTT AATCGTTGCG ACGCTGGCAA TCATTGCCTC CGCCGGATTT
TATCTGATGC GGTATACTTC TATTTTTAAG CCTGAGACCG CTGCGGCCGA CGACAAGAAT
GCCGTATTTT CGGAGCAAGC GGTTGGGTAC ATTCACCGGA GCGATTCACT GGGCGTCACC
ACGCCGCCGC TGCAACACAT TTCCATTCAA CTTAGCCCTA ATACTACCGA AAAGGCGCTG
ACCGCCGCCT TGAAAGTGCC CGTTACGAGC GAAAACTTGC TGGTAACAGT CGTGGCAGGG
CAGGAGGGAG CGCTGGGAAA GGTAACCGAC GGGCAGTTCG ACGACGTGCT GCAAACGCTC
TGCCGCCTTT TACCAAAAAC AAGCCACATT TACCTGCGCT GGGACCCAGA TATGGAGGTG
CCCGTGCAGC GCTATTCATG GCAATACCAG GCTCCGGTCG ATTATATCAA TGCATTCAGG
CATGTAGCCA AAGTCTGCCG CAGCGCCATG CCCTCGATTC AAATCATGTG GTCACCAGCA
GGTTACCCCG GAACCGAGGA ATACTGGCCG GGCGCTGATG TGGTCGACGC GATCGGTATT
TCGGTGAATG GGCAGAGCGA GCTGGCCGCG ACGGCATATC CGCAGGAGCC TGACACACAG
AAGTTGCTTC GCAGAAAGCT GATCCGGACG AGGTTCATGA ACAAGCCCAT TTGGGTGGTC
GCCAGCGGCA CGGACAGCAC CGTGCAGGTC CTCCAAAATG ACCTGAAAGC GGTTGTGCGG
GATATCAAAC GGGATTCCGT GTGGCTTTTT CAGGATTTCG CGATCGGCAC GCCTGAGGGC
CGTAAGCCCG GCGCGGCCCC CTTGTTGGGC GTTTATGATC CGAAACTGGC GCTTACCGGG
TCCAAAAATG TGACTGTCGA GCATTTATTT GTGGATCTCG AAAACATTCA GTCCGGCGCT
TTCGAAAAGG ACTTCAATGC CGTGCTCCAA CGGGGACACC AGGCGATCGT GACCGTGGAG
CCCTGGCGCG ACGGCAAGGT AAGAAAGGAT TCCTCGGTGC TGATGAACAC GATAGCAGGC
GTTTATGATG AAGAATTTAA GTCATTGTTT CAAACAATTT CCAAAACAGA GCGCCCGGTG
TATGTCCGGT TTGCGCATGA AATGGAAATC CCGATCCACC GGTATCCCTG GCAAAGTCAG
GAGCCGGTTT TGTATATCCG GGCTTTCCGG CATTTTATGG AGCTGGGCAG CTGGGTCAAA
AACATGAAAA GGGTGTGGGG CCCGGCGGGC GACAGGGGCT CTATGGAATG GTACCCGGGC
GGCGATGTGG TCGATATGGT CAGCATAGCC ATTTACGGCC TGCCTGATAA AAACATCACC
GATCCCAACA AACAGGAATC TTTCGAAACG ATCTTCAACC GCAAAATATG GCGTATGCGT
TTCGCGTCAA AGCCCATGCT TATTACGGAA TTTGGGGTAA AAGGACCGGA AGATTACCAA
AGCGGGTGGA TGGAAAAGGC AGCGCGGGTA GTGGCGGCGC ATCGGGAGGT AGTAGGCGCG
TGCTACTTCA ATCTGGCGGA TAACCCGGCC GTGTGGGGCG ACATTCCTGC GCCTGATTGG
GGCATTAGTC ACAAAACTTT CAGCCGCTTT GCAGAAGTGC TCAAAAATGC TCAGTGA
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| Protein sequence | MKSKGLLIVA TLAIIASAGF YLMRYTSIFK PETAAADDKN AVFSEQAVGY IHRSDSLGVT
TPPLQHISIQ LSPNTTEKAL TAALKVPVTS ENLLVTVVAG QEGALGKVTD GQFDDVLQTL
CRLLPKTSHI YLRWDPDMEV PVQRYSWQYQ APVDYINAFR HVAKVCRSAM PSIQIMWSPA
GYPGTEEYWP GADVVDAIGI SVNGQSELAA TAYPQEPDTQ KLLRRKLIRT RFMNKPIWVV
ASGTDSTVQV LQNDLKAVVR DIKRDSVWLF QDFAIGTPEG RKPGAAPLLG VYDPKLALTG
SKNVTVEHLF VDLENIQSGA FEKDFNAVLQ RGHQAIVTVE PWRDGKVRKD SSVLMNTIAG
VYDEEFKSLF QTISKTERPV YVRFAHEMEI PIHRYPWQSQ EPVLYIRAFR HFMELGSWVK
NMKRVWGPAG DRGSMEWYPG GDVVDMVSIA IYGLPDKNIT DPNKQESFET IFNRKIWRMR
FASKPMLITE FGVKGPEDYQ SGWMEKAARV VAAHREVVGA CYFNLADNPA VWGDIPAPDW
GISHKTFSRF AEVLKNAQ
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