Gene Dfer_3033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3033 
Symbol 
ID8226607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3709360 
End bp3710559 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content52% 
IMG OID644930864 
Productputative acetyl xylan esterase 
Protein accessionYP_003087413 
Protein GI255036792 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCC TGACTAACCA CCACATGAAA AAAACTGCCA TTCTCTGCAT GTTGCTCGCT 
GCTCCCTTTT GGGCGGCATT CGCCCAGAAT TATGATGAAT CCAAAGTGCC GCATTATACT
TTGCCGGACG TGCTCAAAAC CGCTTCGGGA AAGACCATTC GCAGTGAAGA GAAATGGGAG
AAGCTGAGAA GGCCGGAAGT GCTGAGGCTG TTCGAAGATC ATATTTACGG ACAAATGCCG
GTCGGCTACG ATAGCATCCG CTATGCCCTC ACGGAAGATG ACCGGCCTGA AATGGATGGC
AAGGCGGTTT TAAAACAAAT CGGGGTGACC GTTTTCAGGA ATGGGAATTC GGTGCAGATC
AATGTCGTGC TTTTTGTTCC AACCCAGGCG AAGAAGCCCG TACCGGTGTT TTTGCTGATC
AATAACCGCG GGAAGGACCT TACCGACCCT ACCAGAGCTA AAAAGAGCGA ATTCTGGCCA
GCCGAAATGG TAGTCGACAG TGGTTTTGCG ATTGCGGCAT TTCATGTAAG TGACCTGGCG
CCGGACAATA AAGACACCTA CATGACCGGC GTTTTGCAAA AACTCTACCC CGAGCAGCTG
AAAAAGGACA ATGGCATGAA AGCCATTGGC GCCTGGGCAT GGGGCGCGAG TCGCGTGATG
GATTATTTCG GGACTGATAA AGACATCGAT TCGAAGAAAG TGATCGTCGT GGGGCATTCG
CGCGGCGGTA AAACTTCGCT TTGGGCTGCT GCACAGGACC GGCGGTTTGC AGCTTGCGTT
ACCAACTGTT CGGGCAACAC GGGAGCGGCA CTGGCACGGC GGCAGTTCGG AGAGCGGATC
AGCCGCATTA ATACCACGTT TCCGCATTGG TTTAACAATA ATTACAAGAA GTACAACGAC
AAGGAAAATG CGCTGCCGGT GGACCAGCAT ATGCTCATCG CGCTCATCGC GCCGCGGCCG
GTTTATGCTA CCAATGCCTC CAAAGACCTC TGGGCCGATC CGAAAGGTAC ATTTCTGGCT
GTGAAGGCTG CCGAACCCGT CTATGCTTTG TACGGCGTCA AGCCCGAGCT GCCCAAGGAG
ATGCCGGGCA TTGATATGCC GGTGATCGGG CCGCATTTCG GGTATCATAA TCATGAAGGC
GAACACAATA TGACTGCCTA CGATTGGGAT AAATTCATCC GTTTCGCAAA ACAGTTTTGA
 
Protein sequence
MTALTNHHMK KTAILCMLLA APFWAAFAQN YDESKVPHYT LPDVLKTASG KTIRSEEKWE 
KLRRPEVLRL FEDHIYGQMP VGYDSIRYAL TEDDRPEMDG KAVLKQIGVT VFRNGNSVQI
NVVLFVPTQA KKPVPVFLLI NNRGKDLTDP TRAKKSEFWP AEMVVDSGFA IAAFHVSDLA
PDNKDTYMTG VLQKLYPEQL KKDNGMKAIG AWAWGASRVM DYFGTDKDID SKKVIVVGHS
RGGKTSLWAA AQDRRFAACV TNCSGNTGAA LARRQFGERI SRINTTFPHW FNNNYKKYND
KENALPVDQH MLIALIAPRP VYATNASKDL WADPKGTFLA VKAAEPVYAL YGVKPELPKE
MPGIDMPVIG PHFGYHNHEG EHNMTAYDWD KFIRFAKQF