Gene Dfer_2987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2987 
Symbol 
ID8226560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3653618 
End bp3655348 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content52% 
IMG OID644930817 
Producthypothetical protein 
Protein accessionYP_003087367 
Protein GI255036746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGT GGCGGCCATG GCTGGGTATC GGCCTGATTG CAATTCCGGT GGTTTACTTT 
TTCATACTGC TCGATGCGCA CGTCGTGAAT ATTCCCTACA CCGACGACTT TAACCTGCTG
GAAACGGTGC AGAAGCTGCG TAACGCGGGC AGTTTGACGG ACATGATGAA AGCGCTTTTT
GAGCAGGTCA ATCAGCATCG GTTCGGCTTC GAGCGGATTG TCATGGTGCT GATGCTGCTG
GTTACGGGAA CGGTCAATAT CAAGACGCAG ATCGTGATCG GTAACCTCTT TTTGCTGGGC
ATTGGCTACC TGTTATATCT CGGCCTTCGG AAAGAACGCA TTTCCTGGTA CCTGTTCATT
CCGGTACCTT ACATACTTTT CAACCTGGTT TTCTTTGAAA ATGCCTATTG GGGGATCGCC
GCGCTGCAAA ACACCCCGCT GATCTTCTTC GCGATGCTGA CCTCCTACGG GCTTGCGCGG
GAGGATGGCA AGGGCTTCCG GATCGCGCTC ATTGCGGCAT TGCTCACAAC TTTCACGAGC
GGCAGCGGCA TGCTTACATG GATCGTCGGC GTCATTATTC TGGCGTTTCA AAAGCGTTTC
AAAAGCTTGC TCTGGTGGGT AGCCGCGAGT GTGGCGGTGC TGCTATTCTA TTTCTTTTTC
GATTACCAGT TTATCAGCTC GGAAGGCACC AAAATTTGGG ACCACCCGGT TTTGAATGTG
ATTTTCCTGA TGGCATTCTG GGGTAATGTC CTGTTTCTCG ACGTGCGGCA CCCGCTCGTG
CCGGCTTTTC ATCAGGACAT TATTGCCTGT GTGCTGCTCG GGGCGGGGCT AGCGCTGGTA
TTTGCCGTGT GGGCGGTCCG GATACTGATA GCCCGCAAGC CGGGCTGGGC CGAATGGTTC
CTCCTTGGTG CGATGATGTT CCTAATGGGC ACAGGCGCTA TGTTCGTCGT GAGCCGGCCG
ATCAATGACT ACGTGATGTA CGGAGGCACC GCATTCTCGC GGCGTTATAT GATATTCGGC
GTGGTGCTGG TGGCGGTGTG TTATGTGTGT GTGCTCGTGG TTTTGAAGAA TTTCAAATCG
TGGAAAAATG CTGCCGCGGT TACGGCTGCG GTGTTTTTTG TGGGGCTAAA CTTTGTGAGC
TATTTCACGT CCATCGTCTC GATCCGTAAG CTGCACGACG AGCTCGTGAT CGACAGCTAT
TTCTGGAAAA ACTATAAAAC TTTTCTGACC GTGGGCGAAA ATTTCACCGA TATCCCATTC
TGGAACCACC CGACCCGGAT GCGGGATCTG ATCATCGGCC TGGAATCGGA GGGGCTCACT
GAATTTTACC AGTTTTACGA CATGCCCGCG CAGGAAGACC TGGTTCGTGA GACAGCGGTG
GCCGGCAAGT CCTTCGAAGG CAGCTTCGAC GCATTGTTCC AATACCGGAA CGGCGAATAC
AACCGCTATA TGAAGTATTT CCAGTTTTTT GTGACACCGC AAAATCCGCC CAAAGGCACA
TTTTACTTCC TGCTCGAATC CCAAAAGAAC AGTATCGTGC TTCCCGCGGT GCCGGTGCCG
AACACGGTTT CCGATTTTCT GCAAAAAGCG ACATATTACA GTAACAATTA CCAGTACGCG
GTTTACAAAC CCAAGCTTCC CGAAGGAAAA TACCGCGCGT GGATCATGTC ACGCGGGGAA
TCGGGCCAAT GGGCGTCTTT TTCCACCGGT AAGCACGTGC TTTATCACTA A
 
Protein sequence
MRSWRPWLGI GLIAIPVVYF FILLDAHVVN IPYTDDFNLL ETVQKLRNAG SLTDMMKALF 
EQVNQHRFGF ERIVMVLMLL VTGTVNIKTQ IVIGNLFLLG IGYLLYLGLR KERISWYLFI
PVPYILFNLV FFENAYWGIA ALQNTPLIFF AMLTSYGLAR EDGKGFRIAL IAALLTTFTS
GSGMLTWIVG VIILAFQKRF KSLLWWVAAS VAVLLFYFFF DYQFISSEGT KIWDHPVLNV
IFLMAFWGNV LFLDVRHPLV PAFHQDIIAC VLLGAGLALV FAVWAVRILI ARKPGWAEWF
LLGAMMFLMG TGAMFVVSRP INDYVMYGGT AFSRRYMIFG VVLVAVCYVC VLVVLKNFKS
WKNAAAVTAA VFFVGLNFVS YFTSIVSIRK LHDELVIDSY FWKNYKTFLT VGENFTDIPF
WNHPTRMRDL IIGLESEGLT EFYQFYDMPA QEDLVRETAV AGKSFEGSFD ALFQYRNGEY
NRYMKYFQFF VTPQNPPKGT FYFLLESQKN SIVLPAVPVP NTVSDFLQKA TYYSNNYQYA
VYKPKLPEGK YRAWIMSRGE SGQWASFSTG KHVLYH