Gene Dfer_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2975 
Symbol 
ID8226548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3639599 
End bp3640873 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content56% 
IMG OID644930805 
Productoxidoreductase domain protein 
Protein accessionYP_003087355 
Protein GI255036734 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAG AGAAAGGAGC CTCCAATTCG CGGAGGCGCT TTATCAAAGG CTCACTGGCG 
ACGCTGGCGA CGTTTTCGAT CGTCCCCCGG CATGTGCTCG GAAAAGGTTA CCTCGCCCCC
AGCGACACGC TCACCAAGGC CATCGTAGGT ACCGGCTCCA TGGGCCGCGG CCACATTCCC
TACGCGGGTA CGAAAGTGGT TGCATTATGT GACGTAGACA AGCGGCACCT CGAAACGGCC
GTTAACATGG TCGATAAGGG TGTTAAAACC TTTTCGGACT ACCGCGAGCT GATCCAGCTG
CCCGAAGTCG ACATCGTGCA CGTTGCCACG CCGCCGCATT GGCACGGCAT TATCGCCGCC
GACGCCGCCC GTGCGGGTAA GGATGTGTGG TGCGAAAAAC CGATGACCCG AACCATCGGC
GAAGGAAAAC GCCTGGTGGA GGCCGTGCAG CAGCATGGAC GCGTGTTCCG TCTCAACACC
TGGTTCCGTT TCGAAAGCAA TTTCTACGGA ATGAACACCA CCGTAAAACC GATTAAAAAA
CTCGTTCAGA GCGGCTTGCT GGGATGGCCG TTGAAAGTGA CCGTGAGCAA GCATACCGGC
TTCGACTGGA AGTTTTATTG GGTAGGTAAA ACAAACAACG TACCTCAGCC GGTGCCATCC
GAGCTCGACT ATGAAATGTG GCTCGGCCCG GCGCCCTACA AACCATATAG CGAACACCGC
GTGCACCAGA CATTCCGCGG CTACTGGGAT TACGACGGCG GCGGACTAGG CGATATGGGC
CAGCATTACA TCGACCCCAT TCAATATTTC CTCGGCAAGG ACGATACCAG CCCCGTAAGT
GTGGAAGTGG ATGCCCCTCA GCAGCATACC GAAGCCGTAG GGACCTGGCG CCGCATTAAC
TACACTTACG CCGACGGTTG CCAGATCGTG CTCGACGGCG AGGCCAAGGA CGACAAAGTG
GCCTACATTG AAGGCCCGAA AGGGAAACTG TACCCTAATT TCAAATCCGA CATTCCGGAC
CTGGAAAAGA AACTGGCCGC ATTCCCTGAT CCTGAGCCGC AGGTTACCGA CTTCGTGGAT
GCTGTGAAAA ACCGTAAAAA ATTCGCACTG AACGAAGAAA ACGGGCACCG CTCCTGCACA
ATCGTGAATA TGGGCCTCAT CGCGTTACGC CTGGGCCGTT CGTTGAAATT CGATCCTGAC
AAACAGGAAT TTATCGATGA CGAAGGCGCC AACCGGCTCA TTAACCAGCC AATGCGCGCT
CCCTGGACCA TTTAA
 
Protein sequence
MKEEKGASNS RRRFIKGSLA TLATFSIVPR HVLGKGYLAP SDTLTKAIVG TGSMGRGHIP 
YAGTKVVALC DVDKRHLETA VNMVDKGVKT FSDYRELIQL PEVDIVHVAT PPHWHGIIAA
DAARAGKDVW CEKPMTRTIG EGKRLVEAVQ QHGRVFRLNT WFRFESNFYG MNTTVKPIKK
LVQSGLLGWP LKVTVSKHTG FDWKFYWVGK TNNVPQPVPS ELDYEMWLGP APYKPYSEHR
VHQTFRGYWD YDGGGLGDMG QHYIDPIQYF LGKDDTSPVS VEVDAPQQHT EAVGTWRRIN
YTYADGCQIV LDGEAKDDKV AYIEGPKGKL YPNFKSDIPD LEKKLAAFPD PEPQVTDFVD
AVKNRKKFAL NEENGHRSCT IVNMGLIALR LGRSLKFDPD KQEFIDDEGA NRLINQPMRA
PWTI