| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2967 |
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| Symbol | |
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| ID | 8226540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3629150 |
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| End bp | 3630379 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930797 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003087347 |
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| Protein GI | 255036726 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCT CTGACCACTA CCCCTATTCG ATCCAGGGAA TCGACCCGAT CCAGCTTACC
AAGCAGTATG GAAGCCCACT TTACGTGTAC GATGGCGCCA CCATCCGCCG AAAAGCGGCC
GAGCTGCAAT ATGCATTTGC GGGGGTGAAT ATGAAGATCA AGTTTGCCTG CAAAGCCAAT
ACTAACCTCG CGATTCTCCG ACTGATGCGT GAAATCGGGG TAGAACTCGA TGTTGTTTCT
CCGGGAGAAC TTGAAATGGG GAAAATCGCC GGGTACGATG CCAGCCAGAT CACTTTCACG
CCCAGCGGCG TGGACTTTGA GGAAGTGCGC GAGGCGGTGG AAACGGGCGC GATCGTGAAT
GTCGACAGCC TTCCGTTGCT GGAATGGTTT GGCCAGACAT ACGGCAACTC AAAACCGTGC
ATGATCCGCA TAAAGCCCAA TGTAGCCGCC GGCGGGCATA CCAAAATCAT GACTGCGCAC
GCCGATTCCA AGTTCGGGAT TTCGGTACTG CTGCTGGACG AGATCCTGGA AATGATCAAA
AAATACGATA TCAAAGTGAT CGGCCTGCAT CAGCACACCG GTTCGGACAT CAAAGACGCC
GAGCCGTTCC TGAAAGTAGC CGATATTCTC CTGGAAACCG CAAAGCATTT CCCCGATCTC
CAAATCATTG ATTTGGGCGG CGGCTTCAAG GTTTCTTACC TGCCGGGCGA TGCCATTACG
GATATGGATT TGCTGGGTAA AAAGATTTCC AAACGCTTCC GGACATTCTG CGAGGAATAC
GGGCGCGATT TGCAGCTCTG GTTTGAACCG GGCAAATTCC TGGTGAGCGA ATCGGGTTTC
CTGTTTGTGA CCACCAACGT GGTGAAAGAA GATCCCGCGC GCAACTTCGT GCACGTGGAT
TCTGGCCTGA ACCACCTCAT CCGCCCGATG ATGTATGGCT CCTACCACCA CATCCTCAAC
ATTTCAAACC CGAAAGGCGA GCCCAAGCAT TACAATGTAG TGGGTTACAT CTGCGAAACC
GACACATTCG CGACAGACCG CGAGCTGCCC GAAGTACGCC AGGGCGATGT ACTCGCATTC
CTCAACGCAG GCGCCTATGG CCTCACGATG AGCTCCAACT ACAATGCCCG CTTCCGCCCG
GCCGAAGTGC TGATCGACAA TGGCGAAGCG AAACTGGTGA GGCGCCGCGA AACGATGGAG
GACTTGCTGA GAACACAAAC CGGCCTTTAA
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| Protein sequence | MQLSDHYPYS IQGIDPIQLT KQYGSPLYVY DGATIRRKAA ELQYAFAGVN MKIKFACKAN
TNLAILRLMR EIGVELDVVS PGELEMGKIA GYDASQITFT PSGVDFEEVR EAVETGAIVN
VDSLPLLEWF GQTYGNSKPC MIRIKPNVAA GGHTKIMTAH ADSKFGISVL LLDEILEMIK
KYDIKVIGLH QHTGSDIKDA EPFLKVADIL LETAKHFPDL QIIDLGGGFK VSYLPGDAIT
DMDLLGKKIS KRFRTFCEEY GRDLQLWFEP GKFLVSESGF LFVTTNVVKE DPARNFVHVD
SGLNHLIRPM MYGSYHHILN ISNPKGEPKH YNVVGYICET DTFATDRELP EVRQGDVLAF
LNAGAYGLTM SSNYNARFRP AEVLIDNGEA KLVRRRETME DLLRTQTGL
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