| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2949 |
|---|
| Symbol | |
|---|
| ID | 8226522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3611301 |
|---|
| End bp | 3612440 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644930779 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_003087329 |
|---|
| Protein GI | 255036708 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TATTGCTGTG CCTTTCGGTT TCACTTTCCG TCACTTTCAG CGCATGCGCC
CAGCAGCAGT CGGCGCCGCT TACCGAACAG CCGCTCGGTT TTGAAGAATA TGACCCGGTT
TCCACATTGA AAGTCGAGGA ACATCCGGTG AAAAAGGCGA AGTTTCCGTT TATCGACGTC
CACAATCATC AGTACCAAAT GCCCTCGCAG GATTTGAAAG CGTTGGTGAA ACAGATGGAT
GCATTAAATA TGGCCATTAT GGTCAACCTG AGCGGTCGCG GGTGGACGCA GGAATGGGCG
GAGGGCACTG CCACGCTGAA AGGCTCGCTG GAAAACGTTT CAAAAAACGA ACCGAAGCGG
ATTGCCGTTT TCACAAACCT GCAATTCAAG GGGTTTGGTG AAAAAGATTG GTCGGCCAGG
GCTGTGAAAC AATTGGAAGA AGATGTAAAA ATGGGCGCGA AAGGCCTGAA AATCTATAAA
AGTTTGGGCT TTACGGGCAT CAAGGACGAC AAAGGCAACC GTGTGCCGGT GAGCGATCCG
CGTTTGCAGC CCGTTTGGCA AAAATGCGGC GAACTAGGCA TTCCCGTGCT GATCCACACC
GCCGATGTGC CTTCGTTCTG GGACCCGATG GACCGCTACA ACGAACGCTG GCTGGAACTC
AAAACCCACC CCGGACGCAA GCGCGGCATC AATGACCCCA TCCCGTTCGA CTCGCTGATC
GCCGAACAGC ACCACATTTT CCGGATGAAC CCCAAAACGA CGTTCATTAA CGCGCATATG
GGCTGGTATC CCAACGACCT CCGAAAACTC GACAGCCTGA TGATCGCGTT TCCGAATATG
TATGTGGAAA TTGGCGCGGT GATCGCGGAA TTGGGCCGCC AGCCCCGGAC CGCCAAGAAG
TTTTTTGATA AATACCAGGA CCGAGTGCTT TTCGGGAAGG ACAGCTGGGT GCCTGCCGAA
TACGCAACCT ACTTCCGGGT GCTGGAAACG GAGGATGAAT ATTTCCCTTA CCATAAAAAG
TACCACGCGT TCTGGCGCAT GTACGGTATG GGGCTTTCCG ACGAAGTTTT GAAAAAGCTC
TATTATAAAA ACGCACTGAA AATCATTCCG GGACTCGACA AAAGCCAGTT CCCAAATTGA
|
|---|
| Protein sequence | MKKVLLCLSV SLSVTFSACA QQQSAPLTEQ PLGFEEYDPV STLKVEEHPV KKAKFPFIDV
HNHQYQMPSQ DLKALVKQMD ALNMAIMVNL SGRGWTQEWA EGTATLKGSL ENVSKNEPKR
IAVFTNLQFK GFGEKDWSAR AVKQLEEDVK MGAKGLKIYK SLGFTGIKDD KGNRVPVSDP
RLQPVWQKCG ELGIPVLIHT ADVPSFWDPM DRYNERWLEL KTHPGRKRGI NDPIPFDSLI
AEQHHIFRMN PKTTFINAHM GWYPNDLRKL DSLMIAFPNM YVEIGAVIAE LGRQPRTAKK
FFDKYQDRVL FGKDSWVPAE YATYFRVLET EDEYFPYHKK YHAFWRMYGM GLSDEVLKKL
YYKNALKIIP GLDKSQFPN
|
|---|
| |