Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2934 |
Symbol | |
ID | 8226507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3598072 |
End bp | 3598614 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644930764 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003087314 |
Protein GI | 255036693 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.690007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACG AAGAATTATT ATCCCTTTTT GAGAATCCCG AAACGCGGAG GAACGCTTTC AATCAGCTGG TGCGGAAGTA CCAGCAAAAA GTATATTGGC TGGTACGGAA GATGGTGGTG GATCATGACG ATGCCAATGA CATTACCCAG GATGTGTTTA TCAAGGCATG GACCGCGCTG GAAAATTTCC GCGGCGACGC CAAGCTGTAC ACCTGGCTCT ATCGTATTGC GAGCAACGAA GCCATAAATT TTCTGAACAA AAAACGCCGG AAATATTTCA TCCCCATTTA CGATGTAGAG AATGAGCTGA GCGAAAAACT GGAAGCCGAT CCCGACGTGA GCGGCGACGC CATTCAGCTC AAATTGCAGA AAGCAATATT AAAATTACCG GAAAAGCAGC GTTTGGTATT TAACCTGAAA TATTTTGAAG ATTTACCCTA TGAAGAGATT TCGGAGATCA CCGGAACGTC GGTAGGAGCG CTAAAAGCCT CATATCATTG GGCTTCGAAA AAAATTGAGG ATTTTTTGAA CGACACCGAT TAA
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Protein sequence | MSDEELLSLF ENPETRRNAF NQLVRKYQQK VYWLVRKMVV DHDDANDITQ DVFIKAWTAL ENFRGDAKLY TWLYRIASNE AINFLNKKRR KYFIPIYDVE NELSEKLEAD PDVSGDAIQL KLQKAILKLP EKQRLVFNLK YFEDLPYEEI SEITGTSVGA LKASYHWASK KIEDFLNDTD
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