Gene Dfer_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2894 
Symbol 
ID8226467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3560446 
End bp3561465 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content50% 
IMG OID644930724 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_003087274 
Protein GI255036653 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.107811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC TCGTTACCGG AGGGGCTGGT TTTATCGGTT CCCACACCGT TGTAGAGTTG 
CACAATGCAG GCTTCGAACC GGTCATTATC GACAACCTTT ACAACTCCAA TCTCAACGTT
TTAGAAGGAA TCAAAAAAAT CACCGGCAAA GCGTTTCCGT TCTACGAAAT TGACTGCAAT
GATGCCGAAA AGGTGAGGGC CCTGTTCGAA AAAGAGCAGT TCGACGGTGT GATCCACTTC
GCTGCGTACA AGGCTGTGGG TGAGTCGGTT GAAAAGCCTT TGAACTACTA TGAGAACAAT
CTGATTTCCC TCATGGTATT GCTCCGCGCC GCGCAGGAAT TCAATGTGGA CAAGTTTGTA
TTCTCCTCGT CGTGCACCGT GTACGGTCAG CCCGAGCAGC TTCCGGTTAC CGAGAACACG
CCGCGCCTAC CTGCCAACTC GCCTTATGGA AACACCAAGG CCATTGCCGA AGACATTATC
CGCGACCATG TGCATTCCAA GCCGGCTTTG AAAGCCATTT CACTGCGTTA TTTCAACCCC
ATCGGCGCAC ACGAAACATC GCTCATCGGA GAGTTGCCCA ATGGCGTTCC GAGTAACCTG
GTGCCATTTA TCACGCAAAC AGCCGCCGGC CTTCGCAAGT CGCTCACGGT ATTCGGAAGC
GACTATGATA CGCCCGACGG CACCTGTATC CGCGACTTCA TCCACGTGGT GGACCTCGCC
AAAGCGCACG TGAAGGCGCT CGATCTGCTC CAATCACAGA CGGATACTAA CTATTATGAT
GTATTTAATG TAGGAACGGG CGAAGGTTAT ACCGTTTTGC AATTGATTAA TACTTTTGAG
GAAGTAAACG GCGTCAAATT GAACTATTCC ATCGGGCCGC GCCGCGAAGG GGACGTCGAG
AAAATCTATG CACAGTCCGA TAAAGTAAAT AATGTAATGA AATGGCGTGC CGAGAAAACC
ATGGCCGACG CCCTGCGCGA CGCCTGGAAC TGGCAACTAA AATTAACAGC TGAAAAATGA
 
Protein sequence
MKILVTGGAG FIGSHTVVEL HNAGFEPVII DNLYNSNLNV LEGIKKITGK AFPFYEIDCN 
DAEKVRALFE KEQFDGVIHF AAYKAVGESV EKPLNYYENN LISLMVLLRA AQEFNVDKFV
FSSSCTVYGQ PEQLPVTENT PRLPANSPYG NTKAIAEDII RDHVHSKPAL KAISLRYFNP
IGAHETSLIG ELPNGVPSNL VPFITQTAAG LRKSLTVFGS DYDTPDGTCI RDFIHVVDLA
KAHVKALDLL QSQTDTNYYD VFNVGTGEGY TVLQLINTFE EVNGVKLNYS IGPRREGDVE
KIYAQSDKVN NVMKWRAEKT MADALRDAWN WQLKLTAEK