Gene Dfer_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2880 
Symbol 
ID8226453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3546354 
End bp3546983 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content53% 
IMG OID644930710 
ProductMgtC/SapB transporter 
Protein accessionYP_003087260 
Protein GI255036639 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00725761 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAATTC TGCCCGAAGA CATTTTAAAA CTCCTCATAT CCTTTACCCT CGGCGCGATC 
ATCGGCGCGG AGCGCGAGTA CCGAAGCAAA TCTGCCGGCT TACGCACGCT GATTTTGATT
TGCATGGGCT CAACTTTGTT TACCATTCTT TCCATTAAGA TCAGTTCCGA CGCCGGGCGT
ATCGCGGCGA ATATCGTGAC GGGCATCGGT TTTATCGGCG CGGGGATCAT TTTCCGGGAG
AATAACCGCG TCGTAGGGAT TACAACAGCG GCGATCGTGT GGGTGACGGC GGCCGTGGGA
ATGGGCATCG GGGCCGGGTT TTATGAGGTA ACCGTTATGT GCTTCGTCAT TTCGGGGATG
ACGCTCGTGA TCCTGGCGCC TGTGCAGAAA TTCATACGGC GCAAAAGCCA GATCCGCAAT
TACCGGATCA TGTGCGTGTA CCAGCGCAAG ACATTGAAAA CGTATGAAAA CCTCTTCAAA
GACTACGACC TAAAAATCCT GCGCGGCGAG CAAAGCCGCA TCGGGACGCA CATTACCGGC
AACTGGACCC TCCAAGGCTC CGAGCGCATG CACGAAAAAC TGACCCACCA CCTGCTGAAC
GATGCCGATA TTCTCGAATT CGATTTTTAA
 
Protein sequence
MEILPEDILK LLISFTLGAI IGAEREYRSK SAGLRTLILI CMGSTLFTIL SIKISSDAGR 
IAANIVTGIG FIGAGIIFRE NNRVVGITTA AIVWVTAAVG MGIGAGFYEV TVMCFVISGM
TLVILAPVQK FIRRKSQIRN YRIMCVYQRK TLKTYENLFK DYDLKILRGE QSRIGTHITG
NWTLQGSERM HEKLTHHLLN DADILEFDF