Gene Dfer_2840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2840 
Symbol 
ID8226413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3504647 
End bp3505003 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content54% 
IMG OID644930670 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003087220 
Protein GI255036599 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.862394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.202643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAT TGAAAGGAAA AGAATACATC GCGGACAGCG AAATCGCCTG GGAAGACCTC 
GGCGGCGGCC TGAAACGGAA GATCATGGCC TACGACGACA ACCTGATGAT GGTTAAGGTC
GCGTTTGAAA AGGGCGGCAT CGGCACGCTG CACAGCCATT TCCATACCCA GATGAGCTAC
GTGGAGAGCG GCGAGTTCGA AATCACGATC GGGGAACGGA AGCAGGTGCT GCGGCAGGGC
GATGTGTATT ACATTCCGCC TCATGCGGTG CACGGCGCGC TGTGCCTTTC GGCAGGCATG
CTGGTGGACA TTTTCACTCC TATGCGGGAG GATTTTGTGA GTATTTCAAA GACATAA
 
Protein sequence
MESLKGKEYI ADSEIAWEDL GGGLKRKIMA YDDNLMMVKV AFEKGGIGTL HSHFHTQMSY 
VESGEFEITI GERKQVLRQG DVYYIPPHAV HGALCLSAGM LVDIFTPMRE DFVSISKT