Gene Dfer_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2793 
Symbol 
ID8226365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3451739 
End bp3452875 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content52% 
IMG OID644930622 
ProductZn-dependent hydrolase of the beta-lactamase fold-like protein 
Protein accessionYP_003087173 
Protein GI255036552 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.351558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC GGATCATTAA ACTTTCCTTC ATGACTTTCT TCATCATTCT GGCTGTGGTA 
GTCATTGCCG CGGTCATATT CATGCAGCAA CCGCTATTCG GCAAGCAACC GTCCGGTGCG
AGGCTCGAAA GGATCAAACA GTCGCCGCAT TACCGCGACG GACAATTCCA GAACGAGCAT
TTCACACCCG ATCTCGCCGA GGGAAATAGT TATCTAAAGG TTTTCACAAA ATTTTTCTTC
GGTAAAAGCA AATACAACAT CCCCGGCGCA TTGATCCCTT CGCAAAAAAC GGATCTGCTC
CACCTGAAAC CGGACGAAAA TGTGCTGGTG TGGTTTGGGC ATTCGTCGTA TTTCATGCAG
ATCGACGGGA AGACAATGCT CGTCGACCCG GTTTTCAGCG GCAGCGCGTC GCCCATTTCA
TTCACCACGC CGAGCTTCAA AGGCACCGAT GTTTATCAGG TGGAAGATTT CCCGTCAATC
GACTATCTGT TCATCTCCCA CGATCACTGG GACCACCTCG ATTACGAAAC GATCCTGAAA
CTCAAACCGA AGGTCAAAAA GGTCATTACC GGCCTCGGAA CCGGCGAACA CCTCGAATAT
TGGGGATACG ACATTGCCCG CATCATTGAA AAGGACTGGA ACGAAAGCGC CGACCTGGGC
GACGGCTTCA TGGTAAACCT TACACCGGGG AGGCATTTCT CGGGCCGCGG TTTCAGCCGT
AACCGTGCCA TGTGGGTGTC GTTCGTGCTG CAAACCCCCA CGAAGAAAAT CTTCATCGGC
GGCGACTCGG GTTATGACGA TCATTTCAAA AGAATCGGCG CGAAATTCGG GCCGTTCGAC
CTTGCGTTGC TGGAATGCGG GCAATATAAT GAAGCCTGGA AATACATTCA CATGATGCCT
GAAGAAACCG TAACCGCTGC CCGCGAGCTG GGCGCAAAGA AGCTGATGCC GGTACATTGG
GCCAAATTCG CATTGTCGAT CCACGACTGG AACGAGCCGA TCCTCCGCGC CAGCGCCGAA
GCTCAGAAGC AGAATATGCC GCTCGTAACG CCTCTAATCG GACAAAAAGT GGATTTGGAC
GGCGACCAGA CGTTCACACA ATGGTGGAAA GAGGCGCGGT TGCAGCCGGA AGAGTAA
 
Protein sequence
MTKRIIKLSF MTFFIILAVV VIAAVIFMQQ PLFGKQPSGA RLERIKQSPH YRDGQFQNEH 
FTPDLAEGNS YLKVFTKFFF GKSKYNIPGA LIPSQKTDLL HLKPDENVLV WFGHSSYFMQ
IDGKTMLVDP VFSGSASPIS FTTPSFKGTD VYQVEDFPSI DYLFISHDHW DHLDYETILK
LKPKVKKVIT GLGTGEHLEY WGYDIARIIE KDWNESADLG DGFMVNLTPG RHFSGRGFSR
NRAMWVSFVL QTPTKKIFIG GDSGYDDHFK RIGAKFGPFD LALLECGQYN EAWKYIHMMP
EETVTAAREL GAKKLMPVHW AKFALSIHDW NEPILRASAE AQKQNMPLVT PLIGQKVDLD
GDQTFTQWWK EARLQPEE