| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2767 |
|---|
| Symbol | |
|---|
| ID | 8226339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 3421472 |
|---|
| End bp | 3422545 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644930596 |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_003087147 |
|---|
| Protein GI | 255036526 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase |
|---|
| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.642402 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAATTAC AAGATTTAAG AAACAGAATC GACGGGCTGG ACGACCAGCT GCTGAGCATT
TTGAACGAGC GTATGGAGCT TGTCAAAAAA GTAGGCGAGC TGAAACGGTC TTCCCAGTCG
ATCATCTACC GCCCCGAAAG AGAAAAGCAA ATTCTCGACC GGCTCGCGCA GCATAACAAC
GGGTTACTCT CCCGGCAGGC GATCGACGCC ATTTTCTTCG AAATTTTTGC CGTATCCCGC
AACCTGGAAC TGCCTGAGCG GATCTCCTAC CTTGGGCCGG AAGGTAGCTT TACGCACCAG
GCGGCCGAAA GCCGCTTCGG CGCCATGAGC GAATATTTGG TTTTGCCTAC CATCCATTCG
GTTTTTGAAA GTGTAGAAAC CGGCCGTGCC AAATTCGGCG TGGTGCCGAT CGAAAATAAC
CAGGAAGGGA TTGTGGTAGA AACAGTGGAT TTCTTGCGTG AGAAGAACTT GTCCATTGTG
GCCGAAATGC TTCTCAAAGT GCATTTCACA TTCGCGTCGC AATCCGATAC CCTGAAATCC
ATCAAAAGGA TTTATTCCAA AGACATTGCA TTCCGGCAAT GCGGGAAGTT CATCAGCGAA
TACCTCGAAG GCATGGGCAT CGAGCTCATT CCTGTGGATT CTACGTCCAA AGCCGCGAAA
CTCGCTTCGG AAGAGCCGGA TGCAGCGGCT ATTTGTTCAT CCATTTCGGC CCGGCTGTTT
GGCGTACCCA TTCTTTTCGA CAATATCGAA GACAGCGATC AGAACCAGAC CCGCTTCCTG
ATCCTCGCGA AAGACTTTAC CAATGTGAAG AGCAGCGACG ACAAAACGAC GATCATCGCC
AACCTGCCCA ACACCAACCG CCCGGGTGTG CTCTACGAAT TCCTGAAAGA CTTCAACGAC
CGGGGCATTA ACCTCACCAA GATCGAAAGC CGGCCGTTAC GCGGCGAGGC GTCGTTCCGC
GCGTGGTTCC TGGTGGAGTT CCTCGGACAT ATGGACGACC CGCAAGTGCG CGAGATCATG
CATAAGTACG GCACGCATTT GAAATGGCTC GGAAGCTACG TGAAAGTTGC CTAG
|
|---|
| Protein sequence | MELQDLRNRI DGLDDQLLSI LNERMELVKK VGELKRSSQS IIYRPEREKQ ILDRLAQHNN
GLLSRQAIDA IFFEIFAVSR NLELPERISY LGPEGSFTHQ AAESRFGAMS EYLVLPTIHS
VFESVETGRA KFGVVPIENN QEGIVVETVD FLREKNLSIV AEMLLKVHFT FASQSDTLKS
IKRIYSKDIA FRQCGKFISE YLEGMGIELI PVDSTSKAAK LASEEPDAAA ICSSISARLF
GVPILFDNIE DSDQNQTRFL ILAKDFTNVK SSDDKTTIIA NLPNTNRPGV LYEFLKDFND
RGINLTKIES RPLRGEASFR AWFLVEFLGH MDDPQVREIM HKYGTHLKWL GSYVKVA
|
|---|
| |