| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2750 |
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| Symbol | |
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| ID | 8226322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3402085 |
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| End bp | 3403527 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644930579 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_003087130 |
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| Protein GI | 255036509 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.207691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.865833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAC AGACGCAGAC GCAGAGACAG ACTTTAAAAT ACTCTCCCTT GCAAATTCAG
ATGCTGAATT TACTGCACCT GACTACAATG GAGCTTGAAC AAAGGATTAA GGAGGAGCTG
GAAGAAAATC CGATACTGGA AGAAGGGAAA GAGGATAGTA CGTCTGAGGA AGCGCCCGAA
GAGTTCGATG ATGCGGATAT TTCATCGGGT GGCGACGATA ATACCGTTCA GGACTATTAT
GACTGGGATG AGTTCCGTGA CGATGATATT CCCGACTACA AAACTTATGC AAACAACCAG
TCGGCCGATA ACGAACTTTA CACCCGGCCG ATGGTGGAGG CCATTTCGTT CCGGGATGAC
CTCAAACAGC AGGTACACTT TCTGCAATTG GATGAGCGTC AGCAACTAAT CGCCGACTTC
ATCCTCGATT CACTGGATGA AGACGGGTTC CTCCGGCGCG AAAGCGATGT AATTGCGGAC
GATATTTCAT TTGCGAACAG CATGTTTATC GATACCGACG AAGTGAACAC GATGCTGAAA
GTGATCCAAC AGCTCGATCC TCCTGGAATT GCGGCCAGTG ACCTGCGGGA ATGTCTGCTC
ATCCAGCTCA ACCGGATGGA TAACCAGAAC GATACCTGGA AATGGGCATA CAAGATCGTG
TGCGACGCAT TCGACGAACT GGGTTCGCGG AACTACGATA AGATTATGCG CATTACCGGC
CTGGACGAGG AGTCGTTGAA AAAGGCCATA CAGCTCATCA CGACGCTCAA CCCGAAACCG
GCCTCGGGCC TGCGGAACGA TGCCATCGTG AACGAAAGCA TTAAGCCCGA TTTCATGCTT
TGGTATACCG AAGACGGAGA GATCGAAGTG CAGCTCACCT GGGGCAACAG TCCTGCATTG
AAGCTGAATA AGGTATTCAC CCAAATGGCG GAAGAAAAGC GCGACAAAGC CACCAACCAG
TTCCTGAAAA ATAAAATGAA CTCGGCCAAG TGGTTTATCG ACGCCATCAA GCAGCGCGAA
AACACGATGC TGAACACGCT GAAAGCCATT GTGAAACTTC AATACGACTA TTTCCAGACC
GGCGACATCA AGAAGCTGCG CCCGATGATT TTGAAAGATG TGGCGGAAAT CATCGATATG
GATATTTCTA CCGTATCTAG GGTAACGACC AACAAATATG TTCAGACGCC ATTCGGCATT
GTGCTGCTGA AAGACTTGTT CACCGAAGGC GTTACCAATG AGGACGGAAC CGAAGTTTCG
AACCGCGAGA TTCAGGAGGC GATCCGCGAG ATTGTCAGCG AAGAGGACAA GCGGCACCCT
TATAATGACC AACAGATTAC AGATATGCTG GCAGTGAAAG GCTACTCCGT TGCACGACGG
ACCGTGGCCA AGTACCGCGA GCAGTTGAAT ATACCTACCG CGAGGTTGAG AGTTACTATT
TAA
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| Protein sequence | MQRQTQTQRQ TLKYSPLQIQ MLNLLHLTTM ELEQRIKEEL EENPILEEGK EDSTSEEAPE
EFDDADISSG GDDNTVQDYY DWDEFRDDDI PDYKTYANNQ SADNELYTRP MVEAISFRDD
LKQQVHFLQL DERQQLIADF ILDSLDEDGF LRRESDVIAD DISFANSMFI DTDEVNTMLK
VIQQLDPPGI AASDLRECLL IQLNRMDNQN DTWKWAYKIV CDAFDELGSR NYDKIMRITG
LDEESLKKAI QLITTLNPKP ASGLRNDAIV NESIKPDFML WYTEDGEIEV QLTWGNSPAL
KLNKVFTQMA EEKRDKATNQ FLKNKMNSAK WFIDAIKQRE NTMLNTLKAI VKLQYDYFQT
GDIKKLRPMI LKDVAEIIDM DISTVSRVTT NKYVQTPFGI VLLKDLFTEG VTNEDGTEVS
NREIQEAIRE IVSEEDKRHP YNDQQITDML AVKGYSVARR TVAKYREQLN IPTARLRVTI
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