| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2748 |
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| Symbol | |
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| ID | 8226320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3399141 |
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| End bp | 3400571 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644930577 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_003087128 |
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| Protein GI | 255036507 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.662437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.393877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATA AATTGATCCG GGTACTTTTG GTTGATGATG ATGAGGATGA CTATTTCCTG
ACCCGGGAGT ATTTTCAGGA CCTTGTCAAC TGGAAATTCG ATATTACCTG GTGTGCCACT
TTCAAGGAAG CCGAAATACA GATCCGCAAC AACAAGTTCG ATCTTTACCT ATTTGATTAC
CTTCTCGGTG AGAGCACTGG TATAGACCTG ATCGAACTCG CTTGCAGCTT CGAATGCGAG
GAGCCCATTA TCCTGCTCAC CGGCAAAGGC GATACTAAGA TCGCCGTGGA AGCATTGCGC
CTCGGAGCGG CCGATTACCT GATCAAAAGC GAGCTCGACG CCGAAAAGCT GGAAAGAAGC
ATCCGCTACG CACTGGAACG CACCTCGGTG CTGAAAGCAT TGCGGCATAG CGAGCGGCGC
TACCGGCGCG TGTTCGAGGA ATCGAACGAT TTCCTGTTCA TCAGTGACCT CGAAGGCAAT
ATCATCGATT TCAACGAGGC CGCCAGCCAG CTGACGGGCT ATTCGGGTGA TCAGTTGAAG
GAAAAAAAGA TTACAGAGCT CGTCGAGGAC CCGCTGTTCG CATCACTCTG GAAAGACATT
GCCGAGCAGC CCATTCACGA CCACGAGGTA CGTCTGCTCA ACAAGGAAGG CGAAAAGCGG
TACTGCCTGT TTTCGGCATC GGTAGAAGTG GACGACGACC ATCCGTATAT TCAGGGCCGA
TTGCATGATA TGACTGCGCG CAAGCAGTCG GAAAAAGAGC GGTTATTTTC AGAAAAAATG
GCGGTTACCG GTCGGCTCGT ACGCATGCTT GCGCACGAAG TCCGCAACCC GCTCACGAAT
GTGAACCTCT CGGCCGAGCA GCTCGAAATG GAGCTGGCCG ACGAAGACCA GAAGTTTTAC
ACACAAATCA TCAAACGCAA CTGCACGCGC ATTAACGACC TCATTACGCA GCTGCTGCAA
CCATCCACTT CGGAGGACAT CGAGCTGATC GAAAGCTCCG TGCATTCGGT GCTCAGCCAG
GCCATTAATG CGGCGCTCGA CCGCGTGCAG CTCAAAAGAA TCCAGATCGT GAACGAATTC
GCGAGCGACG AACTTGCGTT GCCGCTTGAT CAGGTTTCGT TGCAAATGGC TTTTCTTAAC
CTCATTACCA ATGCCATCGA GGCGATGGAA GAGGACCGGG GCGTGTTGCG CATCGCCACC
CGCAGCCAGG GCGACCAGAT CCAGGTGATG TTTACCGACA ATGGCGCGGG CATCAGCGAG
GAGCACATGG ACAAGATCTT CGAACCCTAC TTTACCGGCA AAAACAACGG AATGGGTATC
GGCCTGTCGA CGACCATGAG CATTATTCAC GCGCATCATG GCCGTATCGA AGTGCAATCG
GAGCTCGGCG TGGGTACTAC ATTTACCATC AGCTTTCAAT CCGCCAAATA G
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| Protein sequence | MNNKLIRVLL VDDDEDDYFL TREYFQDLVN WKFDITWCAT FKEAEIQIRN NKFDLYLFDY
LLGESTGIDL IELACSFECE EPIILLTGKG DTKIAVEALR LGAADYLIKS ELDAEKLERS
IRYALERTSV LKALRHSERR YRRVFEESND FLFISDLEGN IIDFNEAASQ LTGYSGDQLK
EKKITELVED PLFASLWKDI AEQPIHDHEV RLLNKEGEKR YCLFSASVEV DDDHPYIQGR
LHDMTARKQS EKERLFSEKM AVTGRLVRML AHEVRNPLTN VNLSAEQLEM ELADEDQKFY
TQIIKRNCTR INDLITQLLQ PSTSEDIELI ESSVHSVLSQ AINAALDRVQ LKRIQIVNEF
ASDELALPLD QVSLQMAFLN LITNAIEAME EDRGVLRIAT RSQGDQIQVM FTDNGAGISE
EHMDKIFEPY FTGKNNGMGI GLSTTMSIIH AHHGRIEVQS ELGVGTTFTI SFQSAK
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