Gene Dfer_2740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2740 
Symbol 
ID8226312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3387731 
End bp3388879 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content56% 
IMG OID644930569 
ProductAcetyl xylan esterase 
Protein accessionYP_003087120 
Protein GI255036499 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.559874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC GATATACCAT ACTCGCAGGC CTGCTGGGCC TCGCATCCAC ATCATTCGCC 
CAGCAAGCCG AACTTTGCCA AGGCGCACAC TTTACAGAAG AACAGGGCAA AGCATTCCTC
GATAGCCACG TCCCGGCATC CAAAGTGGAA TGGGAAGCCC GTGCCGCGGA AATCCGCCAG
CAGATCCGGA ACGGAATGGA TTTGCAAACA TTACCCGAAA AGCCGGCTTC CAAACCAATT
ATCCATTCCA AAAAGGAAAT GGACGGTTAT ACCATCGAGA ATGTCGCATT CGAAAGCATG
CCGGGCATTT ACGTCACCGG CAATTTGTAC CGGCCGACAA AGCAGCAGAA ATCTTACGCC
GCGATTCTTG CGCCGCACGG GCATGGCGAG AACCCGCACG GGCGCTTCCG CGAGCAGACG
CAGAAGCGCT GCGCGACGCT CGCACGTATG GGCGCGATCG TGTTTGTGTG GGACATGGTA
GGCCAGGGCG ATGCCAAACA ATGCGGGCAC AAAATGGCCA AAGCATTGAA ATTGCAGACG
ATCAACAGCA TCCGCTCGCT GGATTTCCTG CTGTCCATCC CGGGCGTGGA TCCGAAGCGC
GTTGCCTGCA CGGGCGAGTC GGGTGGGGGA ACGCAGACGT TCCTGCTGGC CGCACTGGAT
AACCGCGTGA AGGTGTCGGT GCCGGTGGTG ATGGTGTCTT CCTATTTCTT CGGTGGCTGC
GTGTGCGAAA GCGGACTGCC GATCCATAAA AAAGGCAATT ATCAAACCAA TAATGTAGAA
ATAGCCGCAT TAACCGCTCC CCGTCCGATG ATCATGATTT CCGACGGCGG CGACTGGACC
AAAAACACGC CGGAAGTGGA ATATCCTTTC ATGCAGAAGA TTTACGCGCT TTATAATGCG
AAGGACAACC TCGAAGCCGT CCATCTGGCC GACGAAAAGC ACGATTACGG CCCGTCGAAG
CGCAAGGCAA TGTATGCATT CATGGCCAAG CATCTCGACC TCGACCTGAA AGCGGTCACC
CGCGACGGGC AAATCGACGA AGAGCCGGCG AAAGTCCTGG AACAAAAAGA CCTGGCCGTG
TTCGACAACA GTCACCCGCG TCCAGCCAAT GCGGTGATGG GCGACGAAGC GGTGCTTCAA
CTTTTATAG
 
Protein sequence
MKIRYTILAG LLGLASTSFA QQAELCQGAH FTEEQGKAFL DSHVPASKVE WEARAAEIRQ 
QIRNGMDLQT LPEKPASKPI IHSKKEMDGY TIENVAFESM PGIYVTGNLY RPTKQQKSYA
AILAPHGHGE NPHGRFREQT QKRCATLARM GAIVFVWDMV GQGDAKQCGH KMAKALKLQT
INSIRSLDFL LSIPGVDPKR VACTGESGGG TQTFLLAALD NRVKVSVPVV MVSSYFFGGC
VCESGLPIHK KGNYQTNNVE IAALTAPRPM IMISDGGDWT KNTPEVEYPF MQKIYALYNA
KDNLEAVHLA DEKHDYGPSK RKAMYAFMAK HLDLDLKAVT RDGQIDEEPA KVLEQKDLAV
FDNSHPRPAN AVMGDEAVLQ LL