| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2693 |
|---|
| Symbol | |
|---|
| ID | 8226265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3322768 |
|---|
| End bp | 3323403 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644930523 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_003087074 |
|---|
| Protein GI | 255036453 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.719642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.17826 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGT TAATAGAAAA GTTGAATTGG CGCTATGCCA CCAAACGCAT GAACGGCGAG
TCCGTTCCAC AGGAAAAGCT GGACAATATC CTTGAAGCCA TCAAGCTGGC ACCGTCATCG
GTCGGTTTGC AGCCCTATAA TATTGTGATC GTAAAAGATC AGGCACTGAA AGACAGGATC
CACAACGAAG CCGCGTCCCG CCAGGCGCAG ATTCCGGATG CCTCGCATTT GTTGATTTTC
GCCGTTTGGG AGAAGGTTAC GTCGCAGCAT GTGGACGATT ATATCAAATT CTTCGCCGCC
ACCCGCAACA TAAGCGTTGA GTCGCTGGCA GGTTTTCATA GCAGCATTAA CGGTGGTATC
CTCAGCCGTA GCGAGGATGT AAATTTCGAC TGGTCGGCAC GTCAGGCATA CATCGCGTTA
GGCCACGGGC TCGTAGCTGC GGCTACCGAA GAAGTAGACG CCACGCCGAT GGAAGGTTTT
GACGCAGCCA AGGTGGACGA GATCCTCGGA TTGCGCGAGA AAGGGCTGCG CAGCGTGGTA
ATCCTTGCAT TGGGTTACCG CGATGCCGAC AAAGACCCAT ATGTGAATGC CAAAAAAGTG
CGCAGGTCGC GCGAAGAACT TTTTATCTCC ATCTGA
|
|---|
| Protein sequence | MSELIEKLNW RYATKRMNGE SVPQEKLDNI LEAIKLAPSS VGLQPYNIVI VKDQALKDRI
HNEAASRQAQ IPDASHLLIF AVWEKVTSQH VDDYIKFFAA TRNISVESLA GFHSSINGGI
LSRSEDVNFD WSARQAYIAL GHGLVAAATE EVDATPMEGF DAAKVDEILG LREKGLRSVV
ILALGYRDAD KDPYVNAKKV RRSREELFIS I
|
|---|
| |