| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2653 |
|---|
| Symbol | |
|---|
| ID | 8226225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3273971 |
|---|
| End bp | 3274651 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644930484 |
|---|
| Product | protein of unknown function DUF28 |
|---|
| Protein accession | YP_003087035 |
|---|
| Protein GI | 255036414 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAC GGTGGGACAA GATGGCCAAA ACTTTCACGA GGATTGGAAA AGACATCGTT
CTGGCGGTGA AAAACGGAAC TGCAGACCCC GCCACCAACT CGAAACTCCG GGTTCTCCTG
CAAAACGCCA AGGCAGTGAA CATGCCGAAG GAAACCGTGG AAAGGGCTAT CAAACGCGCA
ACTGCCAAAG ATCAGGACGA TTATAAGGAA ATGGTGTACG AAGGCTACGG CCCGCACGGC
ATCGCGATCC TCGTTGAAAG CACGACAGAT AACCCAACCC GCACGGTGGC TAACGTAAGA
AGCTATTTCA ATAAGCTCGG CGGCAGCCTG GGAACAATGG GCATGCTCGA CTTCATTTTC
GACCGCAAAT GCATTTTCAA GATCAAAAAC ACCGGTAAGG ACCTCGAAGA GCTGGAATTC
GAACTGATCG ACGCCGGCGG CGAGGAGGTT TTCCTCGACG AAGAGACTAA CCTGATCAAC
ATTTACGGCG AGTTCTCGGC GTTTGGTGCA TTACAGCATT ATTTCGAAGA GAACGGCTAT
GAAATCGTGG AAGCGGATTT CGACCGCATT CCGAACGATA CCAAGACATT GAGCGAAGAG
CAAATCGCGG AAGTCGAGAA ACTGATCGAA AAGATCGAGG AAGACGACGA CGTGCAGCGC
GTTTACCATA ACATGGCTTA A
|
|---|
| Protein sequence | MFKRWDKMAK TFTRIGKDIV LAVKNGTADP ATNSKLRVLL QNAKAVNMPK ETVERAIKRA
TAKDQDDYKE MVYEGYGPHG IAILVESTTD NPTRTVANVR SYFNKLGGSL GTMGMLDFIF
DRKCIFKIKN TGKDLEELEF ELIDAGGEEV FLDEETNLIN IYGEFSAFGA LQHYFEENGY
EIVEADFDRI PNDTKTLSEE QIAEVEKLIE KIEEDDDVQR VYHNMA
|
|---|
| |