Gene Dfer_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2567 
Symbol 
ID8226139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3170666 
End bp3171451 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content52% 
IMG OID644930399 
Producthypothetical protein 
Protein accessionYP_003086950 
Protein GI255036329 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.465475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA ATAACACCAA AACCGTCGTT TTTGTAACAG GTGCATTTGT AAGCCACAAT 
GGCTGGGACC AATGGAAAGC CTATTTTGAA AACCAGGGAT ACACCACCTA TGCGCCTGCC
TGGCCCCACA AAGATGCCCC CGCTGCCGAG CTGAGAGACA GACAACCGAA TGATACCGCG
CTGGCCGGTC TCACATTTAA AGAGCTGGTC GACCATTATG CCAATTTCAT CAAAGCATTA
CCCGAAAAAC CGATTATCAT CGGGCACTCG CTCGGCGGGC TGATCACCCA GATCCTGATC
AACCGCGACC TGGGCGTTGC CGGTATCGCC ATCCACCCCG TTCCGCCGCA AGGTGTGATC
CCCTACGAAT TCTCGTTCCT GAAAGCGGGT TATAAAGTGT TCGGATTGTT TACCTCATTG
AAAAAAACAT ATCTGATGTC GCTCGCCGAC TGGCAATATG CCTTCACCAA CGGCATGACG
CTGGAAGAGC AAATGCAAAC CTGGGAAGAA AACGTGATCC CTGAATCCAA AACGGTAGCG
CGCGGCGGTA TTACTTCCGC AGCCCGGGTG GATTTTAAAA AAGCGCACGC GCCATTGCTG
ATCACGTCAG GCGAGTTCGA CAACATTATT CCCGCGTCGC TGAACCTCCG CAACTTCAAA
GCCTACAAAC AAAACGGCTC TGTGACAGAT TACAAAGAAT TCCCCGGCCG CAACCACTAC
GTGTTAGGCC AACCCACGTG GAAAGAGGAT GCCGATTACA TCCTCGACTG GATCAGCAAA
CACTGA
 
Protein sequence
MKANNTKTVV FVTGAFVSHN GWDQWKAYFE NQGYTTYAPA WPHKDAPAAE LRDRQPNDTA 
LAGLTFKELV DHYANFIKAL PEKPIIIGHS LGGLITQILI NRDLGVAGIA IHPVPPQGVI
PYEFSFLKAG YKVFGLFTSL KKTYLMSLAD WQYAFTNGMT LEEQMQTWEE NVIPESKTVA
RGGITSAARV DFKKAHAPLL ITSGEFDNII PASLNLRNFK AYKQNGSVTD YKEFPGRNHY
VLGQPTWKED ADYILDWISK H