| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2561 |
|---|
| Symbol | |
|---|
| ID | 8226133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 3164054 |
|---|
| End bp | 3164665 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644930393 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003086944 |
|---|
| Protein GI | 255036323 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTGCG TTACAGAAAA AAGTGAAGAC AGGATAAGGG AAGCGGCGAA GCGTGTTTTT
CTGAAAAAGG GTTTTGACGG CACCACCTCG CGTGACATTG CGAAGGAGGC CGATATGAAC
ATTGCATTGA CCAACTACTA TTTCAGGAGC AAGGAAAAGC TGTTTCTGGA AATATTCAAA
GATGTGCTAG AAGACTATTT CCAGCGGATG CTCGCGATCC TGAACAAGGA GACTGATATA
AAAAATAAGA TTTCGGAGCT GATCGACAAC GACTTCGAAA TGATGAAAAA GGAGCCCGAC
CTGGTAATTT TCATCATGAA CGAAATGCAC AAGGCGCCTC AGCGACTGTT TCCGGATATG
TCGATATTCC GGCAGGTGCG GGAAAGTTAC CTGAAAAAGC AGATCGAAGA GGGAGTGGCT
AACGGCACGT TGCGGGCCAT GGACCTGGAA CACATTCTTC CGCTGATCAA ATGCGGTGTA
GAATTCATTT TCATGGGCCG GGAAATTCAC AAGGAGCTGT TTCAAATGAC CGACCAGGAA
TTTGAAAAGT ATGCGCAGGA ACAGAAAGAG CACATTAAGG CAATGGTGTG CAACTACCTC
GTGTTGAAGT AG
|
|---|
| Protein sequence | MKCVTEKSED RIREAAKRVF LKKGFDGTTS RDIAKEADMN IALTNYYFRS KEKLFLEIFK
DVLEDYFQRM LAILNKETDI KNKISELIDN DFEMMKKEPD LVIFIMNEMH KAPQRLFPDM
SIFRQVRESY LKKQIEEGVA NGTLRAMDLE HILPLIKCGV EFIFMGREIH KELFQMTDQE
FEKYAQEQKE HIKAMVCNYL VLK
|
|---|
| |