| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2558 |
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| Symbol | |
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| ID | 8226130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3158234 |
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| End bp | 3161380 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930390 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_003086941 |
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| Protein GI | 255036320 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.181919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA TTGAAACCAT TCTGAAGCGC CCTTCGATGA TCATCGTGTT GTTCGCGATT
CTGTTCATCG GCGGGTTGGC TTCTTACAAT CAGCTCAGCT ATGTGCTGCT GCCGGAATTT
TCCGTTCCGA CGATTACCAT TACCACATTA TATCCAGGCG CGGCGCCCAC GGAGGTAGAG
GCCGAGGTCA GCAAGAAGAT CGAGGATGCG GTGTCCGGCC TGGATAATAT TGAAGACGTG
ACTTCCAAAT CCATGGAAAG CGCCTCGCTC GTGATCGTGC AGTTTAAGGC GGGTACCGAC
ATTGACAAGG CATTGGAAGA TGCCCAGCGC GATGTGAACA ACATGCTCAG CGACCTGCCC
GACGATGCGG AAACGCCCTC ATTGTCCAAA ATCTCGCCGA GCGACCAGCC CATTATGCAG
CTTCTGGCGA CGTCCAGCCT GCCCAACGAA GTTTTTTACC AGCAGGTAGA AGACAAATAC
CTGCCGATGT TGCAGCAGAT CGAAGGCGTG GCGGAGATCA CCATGACCGG CGGCGACCAG
CGCGAGATCC GTATTAATGT CAATAATGAT AAACTGCGTT TTTACGGCTT GTCGCTGTTG
CAGGTGACAC AGGCCATTAA CCAGGCCAAC CTCGACTTTC CGACCGGAAA AGTAAAAAGC
ACGTCGGAAA ATATGACGCT CCGACTTGCA GGTAAGTTTG CCTCGCTCGA TGACATTCGC
AACCTCGTGA TCACCTCTCC CGTGAGTGGC AGCCCGATCC GCGTGGGGGA TGTGGCCAAC
ATTACCGACG GCCTTACCGA CGCCGAGAGC ATCAGCCGGT ACAATGGCGT GAACGGGATT
GGGTTGTTTA TCAAAAAACA ATCCGATGCC AATGCCGTGG AAATCAGTAA AACCGTGCAG
GAGAAACTGG CGTCCATTGA GAAGGTGAAT GCCAAAGATA AGGTCAAATT CGCCATCGCT
TACGACAGTT CGATATTCAC ACTGGAATCT GTGGAAGCGG TGACGCACGA CCTGGTGATC
GCGGTAATTC TTGTGGCGGT GGTAATGCTG TTGTTCCTGC ACAGCTTCCG GAACGCATTC
ATCGTAATGG TGTCGGTACC GGCCTCGCTC ATTGCCGCAT TCTTGTTTAT GTATGTGATG
GGCTACTCGC TTAACCTGAT GACGCTGCTT GCACTTTCGC TCGTGATTGG TATCCTTGTG
GATGACTCCA TTGTGATCCT GGAAAACATC CAGCGGCATT TGGAAATGGG TAAAAACCGC
TGGGATGCCA CGGTGGAAGG AGTTACGGAG ATTGGCTTTG CGGCGTTGGC CATTACGCTC
GTGATCGTGG TCGTGTTCGT GCCGATCACG ATGGTAAACT CGGTGATCGC GGACTTGCTG
CGCCAGTTTT CGCTCACGGT GGCATTTGCG ACGATGGTCA GCTTGCTCGT TAGTTTTACA
TTAACGCCAT GGATGACGTC CAACATGGCG AAAGTCGAAC ATTTGAACCC CAAAAATCCC
GCGCAGGCTT TCCTGATCTG GTTTGAAAAA GGTTTGACGG CGTTGACCAA ATGGTACCAC
GGCTCCCTGC AATGGGTGCT GGGCCATAAG CTGGCATTCT CGGGCATTCT GGTGGCGATT
GTGGTGATGA CCGGCTGGGT GATGAGCCTG GGCATTATCG GGTCGGAGTT TGTGGCGGAG
GGTGACCAGG GGAAATTCCT GCTCACGATG AAGCTCGACA AAAGCGCCTC ATTGCAACAA
AACAACCTCA CCGCGCGAAG CATTGAAGAC TACCTGCGTC AGAAACCGGA GGTGAAAACG
ATTTTCGCGA ACGTGGGCGG CGCGAGTACC GGCCTAAGCA GCTCCGGCCG CGGCGAAACC
AACCGCACCG AATTGACCGT TGAGCTTACC CCCGTGTCGG AGCGCCAGAA TGCACAACCG
ACGGAAGATT ATATGCTGGC CGTGCGAAAG GAATTGGAAC AAAAATTCGC TGGCGTGGAA
TTCAACTCCG CGGCCATCGG GATGGTGAAT TCCGGCACGG CGCCCATTGA AATATTCCTG
AGCGGCGATA ACCTGGACAA AATTCTCGCC TCTGCCAACG ACCTCGCCAA CCGCCTCCGC
AAAACGCCCG GCGTAAACGA CGTGAACGTG TCCGTAGAAG CAGGTAACCC CGAAGTACGC
GTGGACATCG ACCGTGAAAA AATGGCGAAA CTGGGATTGG ACATTCAAAC AGTAGGCGCA
ACCATGCAGA ATGCATTCGC CGGCAACGAC GATTCCAAAT TCCGCGATGG GGGAGAGGAC
TACGATATCC GCATTATGCT CGACGCATTC GACCGCAAAA ATCCGGAAGA TGTGAAGGCG
ATCACATTTT ATAGCCCGGT GGCTAAGCAA TCCGTGCAGC TGGCTCAGTT TGCCGATGTA
ACGCTCAGCA CTGGCCCAAG TATTGTAGAG CGCAAAAACC GTCGTTCATC CGTCACAGTC
ACCGCCAATA CATTAGGGAT TGGATCGGGA ACTTTGGTGA GTAATATTCA GGCCGGTTTA
AAGGAAAATC CGCTCCCGGA CGACATTATA CTTACCTGGG GCGGCGACGC CAAAAACCAG
AGCGAAGGCT TCGGTTCACT GGGGCTGGCA ATGTTGGCAG GGCTCATGCT GGTATATTTC
ATCATGGTGC TGCTTTACGA CAGTTTTGTG TACCCGTTTG TGGTACTGTT CTCGATCCCG
GTAGCGGTGA TCGGGGCGCT GCTCGCGCTG GCATTGTCAT CGTCCAATAT CGGGATATTC
GCGATGCTTG GGATGCTGAT GCTCATAGGA TTGGTGGTGA AGAATGCGAT CCTGATCGTC
GACTTTGCCA ACCAGCAAAA GGCCGAGGGC GTACCGTTCC GCAAGGCCAT TCTGACAGCC
GGGGAGGAGC GTCTGAGGCC GATCCTGATG ACCACGATCG CGATGGTGAT CGGGATGGTG
CCGATCGCGA CTGCAACGGG CGCCGGGGCC GAATGGAAGA ATTCCCTGGC ATGGGTGCTC
ATCGGCGGTC TCACCAGTTC GATGATCCTC ACGATTTACC TCGTGCCGAT GGCGTACTAC
CTGGTAGATC GCCTCGGGGA AAAGTGGAAT GCGTGGCGCG CCAAGTCGGG CAGGGTACAG
GAAAGCGTTG TAGTGGAAGA AATTTAA
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| Protein sequence | MKFIETILKR PSMIIVLFAI LFIGGLASYN QLSYVLLPEF SVPTITITTL YPGAAPTEVE
AEVSKKIEDA VSGLDNIEDV TSKSMESASL VIVQFKAGTD IDKALEDAQR DVNNMLSDLP
DDAETPSLSK ISPSDQPIMQ LLATSSLPNE VFYQQVEDKY LPMLQQIEGV AEITMTGGDQ
REIRINVNND KLRFYGLSLL QVTQAINQAN LDFPTGKVKS TSENMTLRLA GKFASLDDIR
NLVITSPVSG SPIRVGDVAN ITDGLTDAES ISRYNGVNGI GLFIKKQSDA NAVEISKTVQ
EKLASIEKVN AKDKVKFAIA YDSSIFTLES VEAVTHDLVI AVILVAVVML LFLHSFRNAF
IVMVSVPASL IAAFLFMYVM GYSLNLMTLL ALSLVIGILV DDSIVILENI QRHLEMGKNR
WDATVEGVTE IGFAALAITL VIVVVFVPIT MVNSVIADLL RQFSLTVAFA TMVSLLVSFT
LTPWMTSNMA KVEHLNPKNP AQAFLIWFEK GLTALTKWYH GSLQWVLGHK LAFSGILVAI
VVMTGWVMSL GIIGSEFVAE GDQGKFLLTM KLDKSASLQQ NNLTARSIED YLRQKPEVKT
IFANVGGAST GLSSSGRGET NRTELTVELT PVSERQNAQP TEDYMLAVRK ELEQKFAGVE
FNSAAIGMVN SGTAPIEIFL SGDNLDKILA SANDLANRLR KTPGVNDVNV SVEAGNPEVR
VDIDREKMAK LGLDIQTVGA TMQNAFAGND DSKFRDGGED YDIRIMLDAF DRKNPEDVKA
ITFYSPVAKQ SVQLAQFADV TLSTGPSIVE RKNRRSSVTV TANTLGIGSG TLVSNIQAGL
KENPLPDDII LTWGGDAKNQ SEGFGSLGLA MLAGLMLVYF IMVLLYDSFV YPFVVLFSIP
VAVIGALLAL ALSSSNIGIF AMLGMLMLIG LVVKNAILIV DFANQQKAEG VPFRKAILTA
GEERLRPILM TTIAMVIGMV PIATATGAGA EWKNSLAWVL IGGLTSSMIL TIYLVPMAYY
LVDRLGEKWN AWRAKSGRVQ ESVVVEEI
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