Gene Dfer_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2546 
Symbol 
ID8226118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3145047 
End bp3145679 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content45% 
IMG OID644930378 
Productfatty acid hydroxylase 
Protein accessionYP_003086929 
Protein GI255036308 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.785784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAA ACTATGTCTC CAATTCCACG GAATCTTCAA GGATGTTTAA AAGCGACTTC 
CTCGAAGCGT TTTCCAAGGT ACATTATTCG GTGCCCCTTT TCATTTTCAT ACCAGTGATC
GTTTATTTCT CCTGGAAAGC ACTTGGTCCG GGGGAAATGG CCTGGTATAC TTTTGTTGGC
GTAGTATTCG CGGGGCTGTT CTTCTGGACG TTCACCGAAT ACTTTATGCA CCGGTTCGTG
TTTCATTTTA CACCCCGCGG CAAGGTGATG GAGCGCATCC ATTTCATTTT CCACGGCGTG
CATCATGATT ACCCCAACGA CGCCAAAAGG CTGGTAATGC CGCCATCGGT GAGCATTCCG
CTGGCAACGG CATTCTATTT TCTGTTCACT GTTTTTTTGA GTGAATACTA TGTGGCGGCG
TTTTTTTCGG GGTTTATGGC AGGTTATCTT TTCTATGATA TGAGCCACTA TGCGTTGCAT
CATGCCAATT TCAAATCCGG GTTCTGGAAG AAATTAAAAA GGCATCACAT GCAACATCAT
TATTCGGATG CTAGTAAAGG TTACGGTGTA AGTTCAGATA TTTGGGACAG GGTTTTCGAT
TCAAACGAAG GCCGCGCCCC GAGATCTAAC TAA
 
Protein sequence
MRKNYVSNST ESSRMFKSDF LEAFSKVHYS VPLFIFIPVI VYFSWKALGP GEMAWYTFVG 
VVFAGLFFWT FTEYFMHRFV FHFTPRGKVM ERIHFIFHGV HHDYPNDAKR LVMPPSVSIP
LATAFYFLFT VFLSEYYVAA FFSGFMAGYL FYDMSHYALH HANFKSGFWK KLKRHHMQHH
YSDASKGYGV SSDIWDRVFD SNEGRAPRSN