Gene Dfer_2544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2544 
Symbol 
ID8226116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3143552 
End bp3144280 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content52% 
IMG OID644930376 
ProductS-isoprenylcysteine methyltransferase-like protein 
Protein accessionYP_003086927 
Protein GI255036306 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.5509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.799861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCGA TCGGTAACTT CTTTTTCAAG TACAGAAATA ACTTGTTTAT CCTCCTGTAC 
CTGCTGCTGT TTTTGCCGTC GCCGCAGCTT TTTGCACCCG GCCAGTTCGG CCCCGATTAC
TACCTGTACC CGATCATACT GGGCCTGCTG GTAACGTTTT CGGGCGAGAT CATCCGGGGA
GTGACCATTG GGCTGGCCTA CATTATCCGC GGAGGGCGCG ATAAGAAGGT GTATGCCGAA
GAACTGGTCA CCGAAGGCAT TTTCCGGCAT TGCCGCAACC CGCTGTATGT GGGTAATATC
CTGATGCTGC TCGGTGTGGG CATTCTGGCC AATTCACTGA TCTACGTCGG AATCGTAATG
CCATTGTTTT TGTTCATATA TCAGGCGATC GTTCTCGCTG AGGAGAATTT TCTGAGGAAC
AAATTCGGCG CGCAGTTCGA TGCGTATTGC AGCCGGGTGA ATCGCTGGCT GATTAATTTC
AGCGGTATTT CCGAAACCCT GAGCGGCATG CGCTTTAATT ACAAGCGCTG GCTTTTGAAA
GAATATAACA CCCTGCTGGT GTGGCTGATA GGTATCGCGG CGATCCTGAT TTTCAGGTAT
CCGCAGGTGG TGCCCGAGGC CGGTAACCGG ATCATCGTTT TCGCGGTGAT CGTGCTGATA
CTCGGCGTTT TATACGCCTA TGTGCGGCAC TTGAAGAAGT CGGGCAAAAT GACCGACAGC
ATGGCGTGA
 
Protein sequence
MIAIGNFFFK YRNNLFILLY LLLFLPSPQL FAPGQFGPDY YLYPIILGLL VTFSGEIIRG 
VTIGLAYIIR GGRDKKVYAE ELVTEGIFRH CRNPLYVGNI LMLLGVGILA NSLIYVGIVM
PLFLFIYQAI VLAEENFLRN KFGAQFDAYC SRVNRWLINF SGISETLSGM RFNYKRWLLK
EYNTLLVWLI GIAAILIFRY PQVVPEAGNR IIVFAVIVLI LGVLYAYVRH LKKSGKMTDS
MA