| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2502 |
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| Symbol | truA |
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| ID | 8226074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3080442 |
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| End bp | 3081188 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644930334 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003086885 |
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| Protein GI | 255036264 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.419434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.63805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTATT TCATCGAATT CAGTTACCGC GGTACGGCCT ACAACGGCTG GCAGAAACAA
AACAACGCAT TGGGCGTCCA GGAAGTGCTG GAAGCGGCCC TTGCCAAAGT GCTCCGGGCA
CCGGTGGAGG TTACCGGCAG CAGCCGTACC GATGCGGGTG TTCATGCAGA ACAACAATTC
GCCCATTTTG ATTTGCCGGC GGCAATCCCG GATGTGGATT TAATGGTTTA TAAATTAAAT
GCGCTGGTTC CGAAAGACAT TGCCGTCCAG CGACTCATTC CCGTTGCTGA GGATGTGCAT
TCCCGCTTCG CAGCCACGCA CCGGAAGTAC GAATACCGCA TTACCTTTCA AAAGAACCCG
TTTCTGACGG ATCTGGCAAC GCAAATGCGG CGCAATCTGG ACGTACCCCG CATGAATGAA
GCCGCGGCAC TGCTGCTGGC TCACAACGAT TTCGAGAGTT TCAGCAAGAT CCACACCAAT
GTGAACAATT TCCGCTGCAC CATCACCGAG TCGCGTTGGG TCGAGGTCGG GGAAATGCTG
GTATTTCATG TCAAGGCGAA CCGTTTTCTG CGCGGCATGG TGCGGGCGCT GGTAGGCACG
ATGCTCGAAG TAGGGCGCCA GAAAATTACG GTGGACGATT TTGAACAGAT TATCCTCTCC
CGTAACCGAA AAAATGCCGG AGCACAGGCC CCGGCAGAAG GTTTGTTCCT CGTGGAAGTA
GGTTACCCGG CGTCGTTGCT GGGCTGA
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| Protein sequence | MRYFIEFSYR GTAYNGWQKQ NNALGVQEVL EAALAKVLRA PVEVTGSSRT DAGVHAEQQF
AHFDLPAAIP DVDLMVYKLN ALVPKDIAVQ RLIPVAEDVH SRFAATHRKY EYRITFQKNP
FLTDLATQMR RNLDVPRMNE AAALLLAHND FESFSKIHTN VNNFRCTITE SRWVEVGEML
VFHVKANRFL RGMVRALVGT MLEVGRQKIT VDDFEQIILS RNRKNAGAQA PAEGLFLVEV
GYPASLLG
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