| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2442 |
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| Symbol | |
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| ID | 8226014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3006798 |
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| End bp | 3008531 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644930274 |
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| Product | NHL repeat containing protein |
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| Protein accession | YP_003086825 |
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| Protein GI | 255036204 |
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| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants
[COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0106112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAA AACGTTTCAA ATGGTCTGCC TCTTTCCTGA TGTTGATTGC ATTGGGTTTC
ACGCAGCATT CCGACCGGGA ATTGCCGGTT GTTAATACGA AAAATGGCGG CCTGTTTTTG
CCGGACGGCT TTGAGGCTAC GGTGGTGGTC GACAGCCTGC CGGGGCGTGC GCGGCACATT
GCGGTGAATG ACAATGGCGA TATTTACGTC AAAGCCCGCT TTGCCGACAA GGGCGAATCC
GTGATCGCAT TGCGCGATAC CAACAAGGAT GGACGTGCGG ATATTGTGAA ACATTTCGGC
GGAGCCGCCA AAGAACGCGC TTATGGAACC GCCATGCGCA TTTACAAAGG CTATCTGTAT
TTCAGTTCCG AGCTTGTTGT TTATCGCTAC AAACTGACGC CCGGCAAACT CGTGCCCGAC
AGCCCGGAAG AAGTGATCCT GACCGACGAC CACCCGCACG GCATGCATGA ACACATTGCA
AAGCCGATCA CGTTCGACGA TAAGGGCTTC ATGTACGTGC CTTTTGGTGC CAATTCCAAT
GCATGCCAGG AACAAAACCG CACGCCCGGC TCGAAAGGAA TGGACCCATG CCCTATCCTC
GAAGACCATG GCGGAATATG GAAATTCGAC GCGAATAAAA CCGGCCAGTT GCAGAAAGAC
GGGACAAAGT TTGCCACCGG CCTTCGCAGC GTGGTAGCAT TGGACTGGAA TTTCCAGGAT
AACAACCTGT ACGCCGTTCA GCACGGCCGC GACGACCTGT TGCGCCTCTG GCCGCAGCTT
TTCAATGGGT GGCAAAGTGC CATGCTGCCT TCGGAGGAAT TTTTGAGGGT AAAAGAAGGC
ACGCACGCCG GCTGGCCGTA TTGCTATTGG GATCAAATGC AATCTAAAAA AGTACTGAAC
CCGGAATATG GCGGTGATGG TAAAATTGTA GGTCAATGCG ATCAATATGA AAAACCTTTG
ATCGGTTTTC CGGGCCACTG GGCGCCTAAT GACATCCTGT TTTACCAGGG CAGCCAGTTT
CCGGAGCATT ACAAAAACGG TTCGTTCATA GCATTCCACG GCTCCACCAA CCGCGCGCCT
TATCCGCAAT CAAGCTATTT CATTGGTTTC GTACCATTCA AAAACGGCCA GGTTGCCGGT
GAATACGAAG TGTTCGCAGA CGGTTTCGCC GGCCTCGACC CTATTGTGAA CGTAAGCGAC
GCCGTGTACC GCCCGATGGG CATCGCCATG GGCCCCGACG GCTCGATTTA CATTGCTGAA
ACCGAAAAAG GCAAGATCTG GAAAGTGACC TACAAGGGTA ATAAGAAGAA GTTCAACAAA
ACGGCGATGG CGAAAATGGA GCAGCGCAAA ACGATGTCGC ACATTCGCAC GCCCGATTTT
GTAAACGACA ACCTGGACAA GGACAAGCCG GTAGCCGGCG GAAAAGTGTA CAGCGTGTAT
TGCACGGCCT GCCACCAGCG CAACGGCATG GGCGACTCAC AGCGCTTCCC GCCGCTCGGA
GGGGCCGAAT GGGTCACCGG CGATAAGGAA CGGCTGATCA AAGTGTTGCT GAACGGACTC
GAAGGCCCGA TTGAAGTAAA AGGACAAGCC TATAACAATG TGATGCCGCA GCACAGCTTT
TTGAAAGACG AGGAAATCTC CGAAGTCCTC ACCCACATTC GAAGCAATTT CGGCAACAAT
GCGAGCCCTG TTACCACCGA GGAAGTAGCC AAAGTAAGGG CCTCGCTCAG ATAG
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| Protein sequence | MQRKRFKWSA SFLMLIALGF TQHSDRELPV VNTKNGGLFL PDGFEATVVV DSLPGRARHI
AVNDNGDIYV KARFADKGES VIALRDTNKD GRADIVKHFG GAAKERAYGT AMRIYKGYLY
FSSELVVYRY KLTPGKLVPD SPEEVILTDD HPHGMHEHIA KPITFDDKGF MYVPFGANSN
ACQEQNRTPG SKGMDPCPIL EDHGGIWKFD ANKTGQLQKD GTKFATGLRS VVALDWNFQD
NNLYAVQHGR DDLLRLWPQL FNGWQSAMLP SEEFLRVKEG THAGWPYCYW DQMQSKKVLN
PEYGGDGKIV GQCDQYEKPL IGFPGHWAPN DILFYQGSQF PEHYKNGSFI AFHGSTNRAP
YPQSSYFIGF VPFKNGQVAG EYEVFADGFA GLDPIVNVSD AVYRPMGIAM GPDGSIYIAE
TEKGKIWKVT YKGNKKKFNK TAMAKMEQRK TMSHIRTPDF VNDNLDKDKP VAGGKVYSVY
CTACHQRNGM GDSQRFPPLG GAEWVTGDKE RLIKVLLNGL EGPIEVKGQA YNNVMPQHSF
LKDEEISEVL THIRSNFGNN ASPVTTEEVA KVRASLR
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