| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2385 |
|---|
| Symbol | |
|---|
| ID | 8225957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2943968 |
|---|
| End bp | 2945086 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644930217 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003086768 |
|---|
| Protein GI | 255036147 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.254446 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGC AACTCTACTG GGCATATAGT TTGGTAATTC TGGTCGGCCT ATCTCTCAGT
TGCCGCTATC CCGCAGCTGA ACCGGGCCCT GTCGATGGCG GCGGCGCTGA CACGACTGTC
CCCAATAACC CCGACACGGT GATTATTGAC ACCATTCCAG CCAAGAATCC CGATTCGCTG
CTCGCGCGCA CTTCCCGTTT TACTGCCGAA AAACTCTTCG CGATCGAAGC GCTGACCCAA
AGCGGTGGCA TTTATGGCAC CGCGGCCGAC TACCGCGGCC AGAATACCGA GCTTAAATAC
GAATTCATAG CTCCCGCCAA CGATACCATG AAACATCGCC CGTTTGTGCT GATGGTACAT
GAAGGCGCAT TTCTTTTTGG TGATCTGAAC AACGAAATGG GCAAGGCCCG CGGGCTTGCG
CAGCGCGGCT TTGCGGCGGC TTCCATTGGC TACCGGCTCG GGTTCGACGG TGCTAGTGAA
CAAAACCCAT GCGGCGGCAA CGGCAATGGA GCAGTGCGGG CGGTTTACCG GTCGGTGCAG
GATTTGTATA CTGCCATTCA TTATTTCGTC GACCGGGCAG ACGAGTTCGG GATCGATACA
CGGCAGCTGA TGTTGGCCGG CAGCAGTGCC GGGGCCATTA CGGCCACAGC GCTCGTATAT
ATGAGAGAGG CCGATTTCGA GGCGCTTTCG CCAGGCATTA CCCAGGCATT GGGCCCGCTG
GATCCCCAGG CTGAGAACAG CCCTTTCCGC GTGCGCGCGC TGCTCACGCA ACTGGGCTAC
GGCATATTCC GCAGCGAATA CATCACCGAG AGCAAGGCCA TGCCCACCTT GTTTTTCCAG
CGAATAGGGG ATAACGTGCT GCCCTATTAT AAAGGTACAT TCCTTTCCTG CCCTACATAC
CTGCCCATGG AAGGTGCAAA AATGGCGTCC GACCGGTTGA AACAATTCAA AATCCCGTTC
GAACTCAACT ATGAAAACCT TGAAGGGCAT CATCTGAGCT ATCCCGAAGA TTACGTGGTG
GATCGCTATG CCGAATTTAT GAAACGGCTA TGGTCGCAAA ACCTGCGGCA GCTCACCAAC
GACGGCTATA AAAACGTGGA AGACGTAGCG CTCCAATGA
|
|---|
| Protein sequence | MLKQLYWAYS LVILVGLSLS CRYPAAEPGP VDGGGADTTV PNNPDTVIID TIPAKNPDSL
LARTSRFTAE KLFAIEALTQ SGGIYGTAAD YRGQNTELKY EFIAPANDTM KHRPFVLMVH
EGAFLFGDLN NEMGKARGLA QRGFAAASIG YRLGFDGASE QNPCGGNGNG AVRAVYRSVQ
DLYTAIHYFV DRADEFGIDT RQLMLAGSSA GAITATALVY MREADFEALS PGITQALGPL
DPQAENSPFR VRALLTQLGY GIFRSEYITE SKAMPTLFFQ RIGDNVLPYY KGTFLSCPTY
LPMEGAKMAS DRLKQFKIPF ELNYENLEGH HLSYPEDYVV DRYAEFMKRL WSQNLRQLTN
DGYKNVEDVA LQ
|
|---|
| |