Gene Dfer_2377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2377 
Symbol 
ID8225949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2934917 
End bp2935804 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content48% 
IMG OID644930209 
ProductOmpA/MotB domain protein 
Protein accessionYP_003086760 
Protein GI255036139 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.447675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.71543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA CGCTTTTAGC CGTTGCTATG CTCTTTGTAC TGGGCTCATG TGCCAGCAAG 
AAAAAATTGC TCTCCGCACA GAAGCAAGCC AATGAGATCC AAATCCAACT GGACAAAGCA
AGAGCCGACC TGAATGATTG TGACAGCAGA ACTGCTGGTT TGAATAATGA TTTGAAGGCA
AAAAATGACG AGTTGACCAG CAAAAACGCG AAAATGAAAG AGCTGGAAGA CCAGGTTGAA
TTCCTTAAAA AGAACAACAA CAACCTTTTG GACCGCATGT CGGATCTTTC CGTGATCTCG
AAAGAAGGTT CAGAAAGCAT CAAGAAATCA CTGGCTATGA TGGACCAGCA GGGCGCTCAG
ATCCGCGACC TGAACAAGAG CATCCAGCAC AAGGATTCTT TGAACATGGC GCTGGTACTG
AACCTGAAAC GTTCATTGGC TGATGTAAGC GACGAGGATG TTCAGATCGA AGTGAAAAAA
GGCGTAGTTT ACGTTTCCCT CTCCGACAAA ATGCTTTTCC GCTCAGGAAG CTCTGTGATC
AACTCTGCTG CTGACAATGT GTTGAGCAAA GTGGCGAAGA TCCTGAACGA CTACAAAGAG
ATCGAAATCC TGATCGAGGG TCACACGGAT AATGTACCCA TCGCGACAGA CAAAGTGGCG
GATAACTGGG ATCTTTCCGT ACTGCGTGCA ACTGCCGTTG CCCGTACGCT TCAAAAGAAA
TACGGAGTTG AGCCGGTACG TATGATCGCC GGCGGCCGTG GCGAATATCT CCCCAAAGTG
GCTAACGATT CAGCGCCTAA CCGCAGCCTG AACCGTCGCA CGGAGATCAT CATTACGCCG
AAACTCGATC AGTTCTTCAA CCTTTATACA CCGAACGCCG GTAAATAA
 
Protein sequence
MKQTLLAVAM LFVLGSCASK KKLLSAQKQA NEIQIQLDKA RADLNDCDSR TAGLNNDLKA 
KNDELTSKNA KMKELEDQVE FLKKNNNNLL DRMSDLSVIS KEGSESIKKS LAMMDQQGAQ
IRDLNKSIQH KDSLNMALVL NLKRSLADVS DEDVQIEVKK GVVYVSLSDK MLFRSGSSVI
NSAADNVLSK VAKILNDYKE IEILIEGHTD NVPIATDKVA DNWDLSVLRA TAVARTLQKK
YGVEPVRMIA GGRGEYLPKV ANDSAPNRSL NRRTEIIITP KLDQFFNLYT PNAGK